CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0000457601
(
Schistosoma margrebowiei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMRZ_0000457601
T156263_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0000457601-mRNA-1
C2H2 ZF
449
471
YLCKGCNRTTKRLRPMQQHLLSH
SMRZ_0000457601-mRNA-1
C2H2 ZF
478
499
LCVKCLKGFNDKYDMKRHTRKH
SMRZ_0000457601-mRNA-1
C2H2 ZF
505
528
YVCPECGRSFSQRCSLEGHRRKIH
SMRZ_0000457601-mRNA-1
C2H2 ZF
545
567
VCETCGYSCPKLYDMLQHTLNNH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma margrebowiei
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMTD_0001526501
Schistosoma mattheei
SMTD_0001526501
N
0.827
A_04970
Schistosoma haematobium
A_04970
N
0.826
TRE_0000323601
Trichobilharzia regenti
TRE_0000323601
N
0.824
Sjc_0111620
Schistosoma japonicum
Sjc_0111620
N
0.769