CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0001267901
(
Schistosoma mattheei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMTD_0001267901
T156370_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0001267901-mRNA-1
C2H2 ZF
470
492
YVCMVCSRQFTRSDMLVRHAHVH
SMTD_0001267901-mRNA-1
C2H2 ZF
498
520
FECIICGQAFSRSDHLSTHQRTH
SMTD_0001267901-mRNA-1
C2H2 ZF
526
548
YQCSLCYYSASRRDMITRHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mattheei
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_00934
Schistosoma haematobium
A_00934
N
0.827
SCUD_0000616201
Schistosoma curassoni
SCUD_0000616201
N
0.827
SMRZ_0001591901
Schistosoma margrebowiei
SMRZ_0001591901
N
0.827
SROB_0001323001
Schistosoma rodhaini
SROB_0001323001
N
0.817
Smp_149680
Schistosoma mansoni
Smp_149680
N
0.797
csin103227
Clonorchis sinensis
csin103227
N
0.793
T265_09709
Opisthorchis viverrini
T265_09709
N
0.777
ECPE_0001002501
Echinostoma caproni
ECPE_0001002501
N
0.773
SMU15002537
Schmidtea mediterranea
SMU15002537
N
0.761
SMU15006028
Schmidtea mediterranea
SMU15006028
N
0.761