CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMUV_0000257901
(
Syphacia muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMUV_0000257901
T156423_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000257901-mRNA-1
C2H2 ZF
56
81
LICEWEGCDRPFSTQKALVDHVSTAH
SMUV_0000257901-mRNA-1
C2H2 ZF
91
112
RGCDREEAFKAQYMLVVHVRRH
SMUV_0000257901-mRNA-1
C2H2 ZF
119
142
VCTFAGCDKSYSRLENLKTHLRTH
SMUV_0000257901-mRNA-1
C2H2 ZF
148
173
YKCEFVDCGKAFSNASDRAKHQNRTH
SMUV_0000257901-mRNA-1
C2H2 ZF
179
204
YQCMIDKCEKSYTDPSSLRKHIKTVH
Links
Other
C2H2 ZF
family TFs
Other
Syphacia muris
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_11876
Ascaris suum
ASU_11876
N
0.791