CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000470601
(
Syphacia muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMUV_0000470601
T156430_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000470601-mRNA-1
C2H2 ZF
237
259
CRCSECGQSFVNTARLERHLAVH
SMUV_0000470601-mRNA-1
C2H2 ZF
265
286
FLCPLCGKTYKYEYNLFFHWRK
Links
Other
C2H2 ZF
family TFs
Other
Syphacia muris
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L893_g796
Steinernema glaseri
L893_g796
N
0.782
ACAC_0001131801
Angiostrongylus cantonensis
ACAC_0001131801
N
0.768
ANCCEY_14463
Ancylostoma ceylanicum
ANCCEY_14463
N
0.768
ANCDUO_04452
Ancylostoma duodenale
ANCDUO_04452
N
0.768
CGOC_0000552301
Cylicostephanus goldi
CGOC_0000552301
N
0.768
DICVIV_06386
Dictyocaulus viviparus
DICVIV_06386
N
0.768
HCOI01148500
Haemonchus contortus
HCOI01148500
N
0.768
HPLM_0001291301
Haemonchus placei
HPLM_0001291301
N
0.768
NBR_0000893801
Nippostrongylus brasiliensis
NBR_0000893801
N
0.768
OESDEN_19993
Oesophagostomum dentatum
OESDEN_19993
N
0.768
ACOC_0000050101
Angiostrongylus costaricensis
ACOC_0000050101
N
0.764