CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SROB_0001225901
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0001225901
T156938_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001225901-mRNA-1
C2H2 ZF
117
139
YVCKACGKRFQLLRLLTRHIKCH
SROB_0001225901-mRNA-1
C2H2 ZF
145
167
YLCKFCFKGFNDTFDLKRHTRTH
SROB_0001225901-mRNA-1
C2H2 ZF
173
196
YRCSDCSKAFTQRCSLEAHGRKVH
SROB_0001225901-mRNA-1
C2H2 ZF
212
235
YVCEECGFSTTDAENLRQHTQTVH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_095290
Schistosoma mansoni
Smp_095290
N
0.827
D_00119
Schistosoma haematobium
D_00119
N
0.827