CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0118500
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_0118500
T157392_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0118500.1
C2H2 ZF
32
54
YKCQQCTKSFANNSYLSQHLRIH
SVE_0118500.1
C2H2 ZF
62
83
PCKYCGKSFTQLSHLQQHLRTH
SVE_0118500.1
C2H2 ZF
89
113
YKCKIEGCGKAFSQLSNLQSHSRCH
SVE_0118500.1
C2H2 ZF
119
141
FRCNSCYKCFSEESQLLEHIPKH
SVE_0118500.1
C2H2 ZF
150
172
HLCRFCGKSYAQAVYLEKHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRK_0001643700
Parastrongyloides trichosuri
PTRK_0001643700
N
0.818
SPAL_0001178500
Strongyloides papillosus
SPAL_0001178500
N
0.815
SSTP_0000473100
Strongyloides stercoralis
SSTP_0000473100
N
0.815
RSKR_0000826600
Rhabditophanes kr3021
RSKR_0000826600
N
0.774