CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0127200
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_0127200
T157393_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0127200.1
C2H2 ZF
86
109
YTCRFCPKIFHDRGQLNIHYTHTH
SVE_0127200.1
C2H2 ZF
115
137
YVCETCHMVFGVKRELSTHMRIH
SVE_0127200.1
C2H2 ZF
143
165
HKCTQCGKEFGTRQLLKKHWMWH
SVE_0127200.1
C2H2 ZF
171
193
HVCPHCKKAFFQKGHLTQHLMIH
SVE_0127200.1
C2H2 ZF
199
221
HQCQLCQKTFIFKFDLNRHMKIH
SVE_0127200.1
C2H2 ZF
226
247
FNCQKCGRSFQKQSQQTEHEIK
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0001662200
Strongyloides papillosus
SPAL_0001662200
N
0.827
PTRK_0001627900
Parastrongyloides trichosuri
PTRK_0001627900
N
0.824
SSTP_0000497200
Strongyloides stercoralis
SSTP_0000497200
N
0.824
RSKR_0000813000
Rhabditophanes kr3021
RSKR_0000813000
N
0.769