CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0001193801
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0001193801
T158008_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0001193801-mRNA-1
C2H2 ZF
112
135
YRCPSCPAMYANANAFTKHMREKH
TRE_0001193801-mRNA-1
C2H2 ZF
140
163
YTCRQCEEFFETLSQLFLHARRSH
TRE_0001193801-mRNA-1
C2H2 ZF
206
228
FVCDVCNKRFAQKANMKTHRNRH
TRE_0001193801-mRNA-1
C2H2 ZF
235
259
FRCDTCNKAFSSYDIYLAHLRTREH
TRE_0001193801-mRNA-1
C2H2 ZF
273
294
VKCCGCAVTFDSIYNLNKHTRN
TRE_0001193801-mRNA-1
C2H2 ZF
333
357
ISCPVCGERGFPGFNQLNHHITRAH
TRE_0001193801-mRNA-1
C2H2 ZF
365
388
HVCRYCESTFEVKKELDTHIRNMH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001782101
Diphyllobothrium latum
DILT_0001782101
N
0.781
TTAC_0000117301
Hydatigera taeniaeformis
TTAC_0000117301
N
0.781
ECANG7_00876
Echinococcus canadensis
ECANG7_00876
N
0.774
EmuJ_000596600
Echinococcus multilocularis
EmuJ_000596600
N
0.774
TsM_000623000
Taenia solium
TsM_000623000
N
0.774
Smp_015840
Schistosoma mansoni
Smp_015840
N
0.762
Sjc_0034430
Schistosoma japonicum
Sjc_0034430
N
0.762
A_02757
Schistosoma haematobium
A_02757
N
0.762
SCUD_0000712901
Schistosoma curassoni
SCUD_0000712901
N
0.762
SMRZ_0000566901
Schistosoma margrebowiei
SMRZ_0000566901
N
0.762
SROB_0001916001
Schistosoma rodhaini
SROB_0001916001
N
0.762
D915_08997
Fasciola hepatica
D915_08997
N
0.761
MCOS_0000608501
Mesocestoides corti
MCOS_0000608501
N
0.761
SSLN_0000095401
Schistocephalus solidus
SSLN_0000095401
N
0.761