CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CH063_11331
(
Colletotrichum higginsianum
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
CH063_11331
T158383_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02173
M01893_2.00
Neurospora crassa
NNRKTSSGGVNN
NNBCCSSAMYNN
PBM
Weirauch et al.(2014)
pTH9665
0.821
0.821
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF40886
C2H2 ZF
53
75
HVCHICKRVYERADHLTRHLRSH
CCF40886
C2H2 ZF
81
103
YQCSRCPKRFNRADLLTRHETTH
CCF40886
Zinc cluster
123
160
EACLNCAASKSKCEDAKPCSRCRSKNLPCEVASKRTHP
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Colletotrichum higginsianum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_4998
Colletotrichum gloeosporioides
CGGC5_4998
I
0.905
CFIO01_06545
Colletotrichum fioriniae
CFIO01_06545
I
0.905
GLRG_02566
Colletotrichum graminicola
GLRG_02566
I
0.869
NechaG91829
Fusarium solani
NechaG91829
I
0.833
FGRRES_08791
Fusarium graminearum
FGRRES_08791
I
0.833
fgenesh1_pm.sca_2_chr3_3_0000229
Nectria haematococca
fgenesh1_pm.sca_2_chr3_3_0000229
I
0.833
FFUJ_06263
Fusarium fujikuroi
FFUJ_06263
I
0.833
FVEG_01911
Fusarium verticillioides
FVEG_01911
I
0.833
FOXG_03048
Fusarium oxysporum
FOXG_03048
I
0.833
FPSE_11956
Fusarium pseudograminearum
FPSE_11956
I
0.833
SMAC_05275
Sordaria macrospora
SMAC_05275
I
0.824
NCU02173
Neurospora crassa
NCU02173
D
0.821
NEUTE1DRAFT_149310
Neurospora tetrasperma
NEUTE1DRAFT_149310
I
0.821
estExt_Genewise1.C_20387
Neurospora discreta
estExt_Genewise1.C_20387
I
0.812
VHEMI04212
Torrubiella hemipterigena
VHEMI04212
I
0.762
SAPIO_CDS9919
Scedosporium apiospermum
SAPIO_CDS9919
I
0.750