CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.149510
(
Cucumis sativus
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
Cucsa.149510
T160583_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.149510.1
CBF/NF-Y
17
74
EPVFFNAEQYHGILRRRLSRAKAESENKALKSRKFITSHCIYLLVLIQWGARGCGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Cucumis sativus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla009990
Citrullus lanatus
Cla009990
N
0.732
Cucsa.048230
Cucumis sativus
Cucsa.048230
N
0.732
PGSC0003DMG400011806
Solanum tuberosum
PGSC0003DMG400011806
N
0.725
PRUPE_ppa011627mg
Prunus persica
PRUPE_ppa011627mg
N
0.714
Pm010516
Prunus mume
Pm010516
N
0.714
Ciclev10016491m.g
Citrus clementina
Ciclev10016491m.g
N
0.714
Eucgr.K01943
Eucalyptus grandis
Eucgr.K01943
N
0.714
gene28941-v1.0-hybrid
Fragaria vesca
gene28941-v1.0-hybrid
N
0.714
orange1.1g026474m.g
Citrus sinensis
orange1.1g026474m.g
N
0.714
PDK_20s1414531g001
Phoenix dactylifera
PDK_20s1414531g001
N
0.706