CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_84710001
(
Phytophthora capsici
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
estExt_fgenesh1_kg.C_84710001
T160806_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_84710001
CBF/NF-Y
134
178
SKEEKKEKIAKWLKKRENRNWSNKPSYPVRHSIAKNRKRGEDGRF
Links
Other
CBF/NF-Y
family TFs
Other
Phytophthora capsici
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_140297
Phytophthora capsici
estExt_fgenesh1_kg.C_140297
N
1.000
maker-pag1_scaffold_153-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_153-fgenesh-gene-0.4
N
0.951
maker-par_contig_714-fgenesh-gene-0.3
Pythium arrhenomanes
maker-par_contig_714-fgenesh-gene-0.3
N
0.949