CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_26-snap-gene-0.61
(
Pythium aphanidermatum
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
IPR006695
maker-pag1_scaffold_26-snap-gene-0.61
T162047_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000014409
CENPB
50
101
KRPRYLSDIDRSVIIQRLEKGEKQADLAREFGVTRAAICHINKNKKEMLTRF
Links
Other
CENPB
family TFs
Other
Pythium aphanidermatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_6510-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6510-snap-gene-0.1
N
0.837
fgenesh_scip_prom.46568.4280
Phytophthora kernoviae
fgenesh_scip_prom.46568.4280
N
0.750
maker-pir_contig_1013-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_1013-fgenesh-gene-0.0
N
0.721
PYU1_G008786
Pythium ultimum
PYU1_G008786
N
0.721
F443_02366
Phytophthora parasitica
F443_02366
N
0.712
maker-pag1_scaffold_26-snap-gene-0.60
Pythium aphanidermatum
maker-pag1_scaffold_26-snap-gene-0.60
N
0.712
Physo143270
Phytophthora sojae
Physo143270
N
0.702