CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_4390003
(
Branchiostoma floridae
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
IPR006695
estExt_fgenesh2_pg.C_4390003
T162460_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_4390003
CENPB
7
60
KIPKKTLTLGEKIEVIKRYERGGIGARTLAGQYGVGKTQIQNIVNRKHEYLDDF
Links
Other
CENPB
family TFs
Other
Branchiostoma floridae
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_1440041
Branchiostoma floridae
estExt_fgenesh2_pg.C_1440041
N
0.962
estExt_fgenesh2_pg.C_2270008
Branchiostoma floridae
estExt_fgenesh2_pg.C_2270008
N
0.962
estExt_fgenesh2_pg.C_840128
Branchiostoma floridae
estExt_fgenesh2_pg.C_840128
N
0.962
e_gw.304.34.1
Branchiostoma floridae
e_gw.304.34.1
N
0.774
estExt_GenewiseH_1.C_10350008
Branchiostoma floridae
estExt_GenewiseH_1.C_10350008
N
0.774
e_gw.297.126.1
Branchiostoma floridae
e_gw.297.126.1
N
0.717
e_gw.297.127.1
Branchiostoma floridae
e_gw.297.127.1
N
0.717