gene05159-v1.0-hybrid (Fragaria vesca)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 gene05159-v1.0-hybrid T163525_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.788 0.788
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna05159.1-v1.0-hybrid CG-1 147 199

Links

Other CG-1 family TFs
Other Fragaria vesca TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_021327 Theobroma cacao TCM_021327 I 0.750
AT3G16940 Arabidopsis thaliana AT3G16940 I 0.712