CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava28417.m1
(
Manihot esculenta
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
cassava28417.m1
T165364_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava28417.m1
CSD
10
76
STGRVVRFSDRKGFGFIKPDDGGEDLFVHHTAIKSDGGYRSLAEDDVVEFTVSLSADKYQAINVTSP
Links
Other
CSD
family TFs
Other
Manihot esculenta
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava23478.valid.m1
Manihot esculenta
cassava23478.valid.m1
N
0.970
29405.m000161
Ricinus communis
29405.m000161
N
0.864
SapurV1A.0515s0060
Salix purpurea
SapurV1A.0515s0060
N
0.818
SapurV1A.0130s0430
Salix purpurea
SapurV1A.0130s0430
N
0.788
Lus10028449.g
Linum usitatissimum
Lus10028449.g
N
0.727
Lus10041902.g
Linum usitatissimum
Lus10041902.g
N
0.712