CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_4650010
(
Branchiostoma floridae
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
estExt_gwp.C_4650010
T165383_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_4650010
CSD
20
55
EDVEGGAQLKKGDEVSFFIATDKRNGNVRARKVQLI
estExt_gwp.C_4650010
CSD
63
125
YMGVVCSMKESFGFIERADVVKEIFFHYSEYPGDIREIELGDDVEFSIATRNGKEVATHIKKL
estExt_gwp.C_4650010
CSD
228
283
EMGLVAAMKEGFGFIKCVDRDARMFFHFSELLDPVELHIGDEVEFTVVPCDSRLSQ
estExt_gwp.C_4650010
CSD
355
400
GEKETITYHLRDTDPRSTPQQGDQVEFSVSEQKKTGTRLAVNIKVL
estExt_gwp.C_4650010
CSD
408
470
LQGFIATLKDNFGFIETANHEKEIFFHFSEFDGDITMLDLGDEVEYSTVRKNNKVSAERIFRL
estExt_gwp.C_4650010
CSD
523
560
GITSLADKREFLQKGDVVNFQVATSSSGEERAARVQAV
estExt_gwp.C_4650010
CSD
564
628
VRGSVDTIKGQFGFINYEVGDNKKLFFHLSEVHDGSDLSPGDKVEFVVVCNQKSGKYSACSVKKV
Links
Other
CSD
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_GenewiseH_1.C_30217
Branchiostoma floridae
estExt_GenewiseH_1.C_30217
N
0.964