CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf24710-processed-gene-0.0
(
Meloidogyne floridensis
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
augustus_masked-nMf.1.1.scaf24710-processed-gene-0.0
T165733_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf24710-processed-gene-0.0-mRNA-1
CSD
49
74
VTGIVKWFNVMNGYGFICRDDTNEVL
augustus_masked-nMf.1.1.scaf24710-processed-gene-0.0-mRNA-1
CSD
70
92
TNEVLFDVVEGTKGPEASNVTGP
Links
Other
CSD
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold488-EXSNAP2012.14
Pristionchus exspectatus
scaffold488-EXSNAP2012.14
N
0.854