CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-nMf.1.1.scaf02589-augustus-gene-0.7
(
Meloidogyne floridensis
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
maker-nMf.1.1.scaf02589-augustus-gene-0.7
T165834_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf02589-augustus-gene-0.7-mRNA-1
CSD
69
114
WTGICKWFNVTKGFGFILPDFEEAKEHGDDIFVHQSSLQMPGFRSL
Links
Other
CSD
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc16711
Meloidogyne incognita
Minc16711
N
1.000
maker-nMf.1.1.scaf26540-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf26540-augustus-gene-0.3
N
1.000
MhA1_Contig2304.frz3.gene2
Meloidogyne hapla
MhA1_Contig2304.frz3.gene2
N
1.000