CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf00636-snap-gene-0.14
(
Meloidogyne floridensis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
maker-nMf.1.1.scaf00636-snap-gene-0.14
T166445_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf00636-snap-gene-0.14-mRNA-1
CSL
34
178
EFFCPPPCVYLLGEGWRNRRKALDQIFKRIKEQNEKNSSDFLPNGDSCHEMFSEIISTIGINQPQNATERLSCHHIAHPLDFTNGKDYCAAKALFISDTDKRKYFYLHTTFSHACGGIDIGTFSSQRIKVISKPSKKKQSMKSSD
Links
Other
CSL
family TFs
Other
Meloidogyne floridensis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc18907
Meloidogyne incognita
Minc18907
N
0.878
genemark-nMf.1.1.scaf05232-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf05232-processed-gene-0.1
N
0.871