CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ceh-21
(
Caenorhabditis elegans
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
WBGene00000444
T167387_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed widely. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T26C11.6
CUT
289
366
DDEELDTVDIARRILSELKERCIPQTALAEKILARSQGTLSDLLRMPKPWSVMKNGRATFQRMSNWLGLDPDVRRALC
T26C11.6
Homeodomain
392
447
KVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTVGNFFMNSRRRLR
Links
Other
CUT,Homeodomain
family TFs
Other
Caenorhabditis elegans
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ceh-39
Caenorhabditis elegans
WBGene00000460
N
0.726