CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN25704
(
Caenorhabditis brenneri
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
CBN25704
T168913_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mab-23
M00654_2.00
Caenorhabditis elegans
NHWWBYDN
NHRVWWDN
PBM
Narasimhan et al.(2015)
pTH9082
0.952
0.956
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN25704
DM
4
49
EQYMCQLCANHAIFNQPKKGHKQKCPYRNCPCSLCALNTKRRALDQ
Links
Other
DM
family TFs
Other
Caenorhabditis brenneri
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE12856
Caenorhabditis remanei
CRE12856
I
0.952
mab-23
Caenorhabditis elegans
WBGene00003114
D
0.952
nAv.1.0.1.g09488
Acanthocheilonema viteae
nAv.1.0.1.g09488
I
0.952
WUBG_07178
Wuchereria bancrofti
WUBG_07178
I
0.950
Bm2506
Brugia malayi
Bm2506
I
0.950
ACAC_0000050101
Angiostrongylus cantonensis
ACAC_0000050101
I
0.948
ACOC_0001070801
Angiostrongylus costaricensis
ACOC_0001070801
I
0.948
DICVIV_00315
Dictyocaulus viviparus
DICVIV_00315
I
0.948
HPBE_0000855101
Heligmosomoides bakeri
HPBE_0000855101
I
0.948
NECAME_10548
Necator americanus
NECAME_10548
I
0.948
TCNE_0000373201
Toxocara canis
TCNE_0000373201
I
0.948
ALUE_0000029801
Ascaris lumbricoides
ALUE_0000029801
I
0.947
ANCCEY_09967
Ancylostoma ceylanicum
ANCCEY_09967
I
0.947
ASU_11663
Ascaris suum
ASU_11663
I
0.947
HPLM_0002064201
Haemonchus placei
HPLM_0002064201
I
0.947
NBR_0001972001
Nippostrongylus brasiliensis
NBR_0001972001
I
0.947
OESDEN_14521
Oesophagostomum dentatum
OESDEN_14521
I
0.947
OESDEN_21377
Oesophagostomum dentatum
OESDEN_21377
I
0.947
L596_g22821
Steinernema carpocapsae
L596_g22821
I
0.944
L889_g8599
Steinernema feltiae
L889_g8599
I
0.944
L892_g15684
Steinernema scapterisci
L892_g15684
I
0.944
L893_g14864
Steinernema glaseri
L893_g14864
I
0.944
L898_g15145
Steinernema monticolum
L898_g15145
I
0.944
SMUV_0000842901
Syphacia muris
SMUV_0000842901
I
0.939
CBG09659
Caenorhabditis briggsae
CBG09659
I
0.936
BXY_1235100
Bursaphelenchus xylophilus
BXY_1235100
I
0.935
SPAL_0001524600
Strongyloides papillosus
SPAL_0001524600
I
0.935
SVE_0006900
Strongyloides venezuelensis
SVE_0006900
I
0.935
SSTP_0000299900
Strongyloides stercoralis
SSTP_0000299900
I
0.934
PTRK_0001067200
Parastrongyloides trichosuri
PTRK_0001067200
I
0.927
RSKR_0000942000
Rhabditophanes kr3021
RSKR_0000942000
I
0.927
GPLIN_000975400
Globodera pallida
GPLIN_000975400
I
0.917
Minc03029
Meloidogyne incognita
Minc03029
I
0.875
maker-nMf.1.1.scaf01464-snap-gene-0.10
Meloidogyne floridensis
maker-nMf.1.1.scaf01464-snap-gene-0.10
I
0.875