CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g4334
(
Steinernema glaseri
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
L893_g4334
T169882_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-6
M00655_2.00
Caenorhabditis elegans
NNWWDTDNNN
NNNHAHWWNN
PBM
Narasimhan et al.(2015)
pTH10816
0.859
0.717
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g4334.t1
DM
211
256
RVLFCRKCEGHGVQAILKGHAPTCPYNLCNCKSCEKLMSKRLHSFN
Links
Other
DM
family TFs
Other
Steinernema glaseri
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g31904
Steinernema feltiae
L889_g31904
I
0.964
L898_g22776
Steinernema monticolum
L898_g22776
I
0.964
L596_g15761
Steinernema carpocapsae
L596_g15761
I
0.961
L892_g15289
Steinernema scapterisci
L892_g15289
I
0.961
ASU_03287
Ascaris suum
ASU_03287
N
0.910
TCNE_0001712701
Toxocara canis
TCNE_0001712701
I
0.907
TELCIR_10880
Teladorsagia circumcincta
TELCIR_10880
I
0.906
Hba_17510
Heterorhabditis bacteriophora
Hba_17510
I
0.892
SMUV_0000230101
Syphacia muris
SMUV_0000230101
N
0.861
CBG21552
Caenorhabditis briggsae
CBG21552
I
0.859
CBN19242
Caenorhabditis brenneri
CBN19242
I
0.859
CJA02063
Caenorhabditis japonica
CJA02063
I
0.859
CRE11598
Caenorhabditis remanei
CRE11598
I
0.859
CRE21432
Caenorhabditis remanei
CRE21432
I
0.859
dmd-6
Caenorhabditis elegans
WBGene00007058
D
0.859