Solyc08g008500.2 (Solanum lycopersicum)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 Solyc08g008500.2 T171207_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DOF1.7
M06833_2.00 		Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN
NDDNDNRAAAAGNWRAWDNND		 Dap-seq
OMalley et al.(2016)
Adof1_col_a 		0.571 0.571
DOF1.7
M06834_2.00 		Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH
DNNDDNNAAAAAGYWRNNDNN		 Dap-seq
OMalley et al.(2016)
Adof1_colamp_a 		0.571 0.571
DOF5.8
M06868_2.00 		Arabidopsis thaliana
HHNHHYHHHHYTTTHNCTTTTKNNHHNHW
WDNDDNNMAAAAGNDAAARDDDDRDDNDD		 Dap-seq
OMalley et al.(2016)
AT5G66940_col_a 		0.571 0.571
DOF5.8
M06869_2.00 		Arabidopsis thaliana
NNHNDYWRCTTTTTNNHYHNH
DNDRDNNAAAAAGYWRHNDNN		 Dap-seq
OMalley et al.(2016)
AT5G66940_colamp_a 		0.571 0.571
Dof2
M02674_2.00 		Zea mays
NGCTTT
AAAGCN		 SELEX
Mathelier et al.(2014)
MA0020.1 		0.571 0.571
Dof2
M10436_2.00 		Zea mays
NNDCTTTWNND
HNNWAAAGHNN		 Transfac
Matys et al.(2006)
P$DOF2_01 		0.571 0.571
Dof2
M10437_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DOF_Q2 		0.571 0.571
DOF1.8
M01939_2.00 		Arabidopsis thaliana
NNNCKTTHNN
NNDAAMGNNN		 PBM
Weirauch et al.(2014)
pTH7256 		0.548 0.548
DOF1.8
M01062_2.00 		Arabidopsis thaliana
NHVCTTTWH
DWAAAGBDN		 PBM
Sullivan et al.(2014)
pTH7653 		0.548 0.548
DOF2.5
M01212_2.00 		Arabidopsis thaliana
NNNCKTTWNN
NNWAAMGNNN		 PBM
Lambert et al.(2019)
pTH11562 		0.548 0.548
DOF3.2
M01943_2.00 		Arabidopsis thaliana
NHDNNNNN
NNNNNHDN		 PBM
Weirauch et al.(2014)
pTH7183 		0.548 0.548
DOF5.4
M01948_2.00 		Arabidopsis thaliana
NDCGTTAWCN
NGWTAACGHN		 PBM
Weirauch et al.(2014)
pTH7160 		0.548 0.548
DOF5.4
M01949_2.00 		Arabidopsis thaliana
NWACGTTWHNN
NNDWAACGTWN		 PBM
Weirauch et al.(2014)
pTH7535 		0.548 0.548
DOF5.7
M00862_2.00 		Arabidopsis thaliana
NNNCKTTN
NAAMGNNN		 PBM
Franco-Zorrilla et al.(2014)
Dof5.7 		0.548 0.548
PK14080.1
M01218_2.00 		Cannabis sativa
NCDTTHNN
NNDAAHGN		 PBM
Lambert et al.(2019)
pTH10123 		0.548 0.548
PK20555.1
M01222_2.00 		Cannabis sativa
NNNCTTTWNN
NNWAAAGNNN		 PBM
Lambert et al.(2019)
pTH10144 		0.548 0.548
DOF1.8
M06835_2.00 		Arabidopsis thaliana
WWWYHMCTTTTTNNNHNHW
WDNDNNNAAAAAGKDRWWW		 Dap-seq
OMalley et al.(2016)
At1g64620_100ng20cy_b 		0.548 0.548
DOF1.8
M06836_2.00 		Arabidopsis thaliana
NHHMCTTTTTN
NAAAAAGKDDN		 Dap-seq
OMalley et al.(2016)
At1g64620_colamp_a 		0.548 0.548
DOF3.2
M06847_2.00 		Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN
NNDDADDNNAAAAAGBDRN		 Dap-seq
OMalley et al.(2016)
At3g45610_col_a 		0.548 0.548
DOF3.2
M06848_2.00 		Arabidopsis thaliana
NNHDDYHVCTTTTTB
VAAAAAGBDRHHDNN		 Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a 		0.548 0.548
DOF2.5
M06843_2.00 		Arabidopsis thaliana
DYHMCTTTTTN
NAAAAAGKDRH		 Dap-seq
OMalley et al.(2016)
DAG2_col_a 		0.548 0.548
DOF2.5
M06844_2.00 		Arabidopsis thaliana
HWDYHMCTTTTTN
NAAAAAGKDRHWD		 Dap-seq
OMalley et al.(2016)
DAG2_colamp_a 		0.548 0.548
DOF5.4
M06865_2.00 		Arabidopsis thaliana
DNWNYHMCTTTTTN
NAAAAAGKDRNWNH		 Dap-seq
OMalley et al.(2016)
OBP4_col_a 		0.548 0.548
DOF5.4
M06866_2.00 		Arabidopsis thaliana
HWDYHVCTTTTTNNNHHNH
DNDDNNNAAAAAGBDRHWD		 Dap-seq
OMalley et al.(2016)
OBP4_colamp_a 		0.548 0.548
Q6RK62_WHEAT
M10441_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PBF_Q2_01 		0.548 0.548
DOF5.3
M01947_2.00 		Arabidopsis thaliana
CKTTNNN
NNNAAMG		 PBM
Weirauch et al.(2014)
pTH7182 		0.524 0.524
DOF5.6
M01063_2.00 		Arabidopsis thaliana
NYDDWNNNN
NNNNWHHRN		 PBM
Sullivan et al.(2014)
pTH7192 		0.524 0.524
DOF5.6
M01950_2.00 		Arabidopsis thaliana
NCKTTWNN
NNWAAMGN		 PBM
Weirauch et al.(2014)
pTH7655 		0.524 0.524
PK07031.1
M01216_2.00 		Cannabis sativa
NCKTTHN
NDAAMGN		 PBM
Lambert et al.(2019)
pTH11435 		0.524 0.524
PK10955.1
M01217_2.00 		Cannabis sativa
VCTTTWNN
NNWAAAGB		 PBM
Lambert et al.(2019)
pTH10264 		0.524 0.524
PK20317.1
M01221_2.00 		Cannabis sativa
CKTTWNN
NNWAAMG		 PBM
Lambert et al.(2019)
pTH11298 		0.524 0.524
DOF5.6
M06867_2.00 		Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH
DDDDDDDDNAAAAAGNDRADD		 Dap-seq
OMalley et al.(2016)
At5g62940_col_a 		0.524 0.524
DOF4.5
M06859_2.00 		Arabidopsis thaliana
AAAKYHDCTTTWTN
NAWAAAGHDRMTTT		 Dap-seq
OMalley et al.(2016)
dof45_col_a 		0.524 0.524
DOF4.5
M06860_2.00 		Arabidopsis thaliana
WAAAGYYDCTTTWDN
NHWAAAGHRRCTTTW		 Dap-seq
OMalley et al.(2016)
dof45_colamp_a 		0.524 0.524
MNB1A
M02677_2.00 		Zea mays
DCTTT
AAAGH		 SELEX
Mathelier et al.(2014)
MA0053.1 		0.524 0.524
MNB1A
M10440_2.00 		Zea mays
NNDCTTTWNNN
NNNWAAAGHNN		 Transfac
Matys et al.(2006)
P$DOF1_01 		0.524 0.524
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc08g008500.2.1 Dof 20 69

Links

Other Dof family TFs
Other Solanum lycopersicum TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g023047m.g Citrus sinensis orange1.1g023047m.g I 0.719
Ciclev10021521m.g Citrus clementina Ciclev10021521m.g I 0.719
Ca_04005 Cicer arietinum Ca_04005 I 0.677
Ca_03849 Cicer arietinum Ca_03849 I 0.677
OS09G0475800 Oryza sativa OS09G0475800 I 0.632
evm.TU.supercontig_96.59 Carica papaya evm.TU.supercontig_96.59 I 0.625
gene25096-v1.0-hybrid Fragaria vesca gene25096-v1.0-hybrid I 0.595
OMERI09G10600 Oryza meridionalis OMERI09G10600 I 0.595
MTR_2g059540 Medicago truncatula MTR_2g059540 I 0.595
GSMUA_Achr4G30470_001 Musa acuminata GSMUA_Achr4G30470_001 I 0.595
ORUFI02G29040 Oryza rufipogon ORUFI02G29040 I 0.571
ONIVA04G20570 Oryza nivara ONIVA04G20570 I 0.571
OPUNC04G19770 Oryza punctata OPUNC04G19770 I 0.571
ONIVA02G30480 Oryza nivara ONIVA02G30480 I 0.571
ORGLA04G0190600 Oryza glaberrima ORGLA04G0190600 I 0.571
OPUNC02G25290 Oryza punctata OPUNC02G25290 I 0.571
OMERI02G26850 Oryza meridionalis OMERI02G26850 I 0.571
LPERR04G17990 Leersia perrieri LPERR04G17990 I 0.571
LPERR02G22470 Leersia perrieri LPERR02G22470 I 0.571
OBART02G27590 Oryza barthii OBART02G27590 I 0.571
OGLUM02G28130 Oryza glumaepatula OGLUM02G28130 I 0.571
ORUFI04G23630 Oryza rufipogon ORUFI04G23630 I 0.571
OGLUM04G22040 Oryza glumaepatula OGLUM04G22040 I 0.571
OMERI04G18510 Oryza meridionalis OMERI04G18510 I 0.571
scaffold_803422.1 Arabidopsis lyrata scaffold_803422.1 I 0.571
evm.TU.supercontig_15.30 Carica papaya evm.TU.supercontig_15.30 I 0.571
Carubv10011461m.g Capsella rubella Carubv10011461m.g I 0.571
Cagra.15243s0002 Capsella grandiflora Cagra.15243s0002 I 0.571
Pavir.Ga01003 Panicum virgatum Pavir.Ga01003 I 0.571
SapurV1A.0250s0210 Salix purpurea SapurV1A.0250s0210 I 0.571
Thhalv10027080m.g Eutrema salsugineum Thhalv10027080m.g I 0.571
Thhalv10023549m.g Eutrema salsugineum Thhalv10023549m.g I 0.571
Cucsa.113470 Cucumis sativus Cucsa.113470 I 0.571
27395.m000081 Ricinus communis 27395.m000081 I 0.571
Sb06g025680 Sorghum bicolor Sb06g025680 I 0.571
OS04G0567800 Oryza sativa OS04G0567800 I 0.571
Si010443m.g Setaria italica Si010443m.g I 0.571
Si017619m.g Setaria italica Si017619m.g I 0.571
ADOF2 Vitis vinifera VIT_09s0002g02490 I 0.571
Si030774m.g Setaria italica Si030774m.g I 0.571
OS02G0673700 Oryza sativa OS02G0673700 I 0.571
Sb04g032040 Sorghum bicolor Sb04g032040 I 0.571
GRMZM2G114998 Zea mays GRMZM2G114998 I 0.571
GRMZM2G171852 Zea mays GRMZM2G171852 I 0.571
Bra031853 Brassica rapa Bra031853 I 0.571
Bo9g020500 Brassica oleracea Bo9g020500 I 0.571
BGIOSGA005855 Oryza indica BGIOSGA005855 I 0.571
BRADI5G18640 Brachypodium distachyon BRADI5G18640 I 0.571
BGIOSGA014530 Oryza indica BGIOSGA014530 I 0.571
GLYMA08G20840 Glycine max GLYMA08G20840 I 0.571
DOF5.8 Arabidopsis thaliana AT5G66940 D 0.571
GRMZM2G089850 Zea mays GRMZM2G089850 I 0.571
Bra010548 Brassica rapa Bra010548 I 0.571
Bo3g154260 Brassica oleracea Bo3g154260 I 0.571
Bo1g037500 Brassica oleracea Bo1g037500 I 0.571
AMTR_s00036p00232310 Amborella trichopoda AMTR_s00036p00232310 I 0.571
Bra013758 Brassica rapa Bra013758 I 0.571
SapurV1A.2125s0010 Salix purpurea SapurV1A.2125s0010 I 0.556
SapurV1A.0032s0330 Salix purpurea SapurV1A.0032s0330 I 0.556
Cagra.1427s0001 Capsella grandiflora Cagra.1427s0001 I 0.548
PRUPE_ppa010132mg Prunus persica PRUPE_ppa010132mg I 0.548
Bostr.29223s0015 Boechera stricta Bostr.29223s0015 I 0.548
POPTR_0001s11130 Populus trichocarpa POPTR_0001s11130 I 0.548
MDP0000183534 Malus domestica MDP0000183534 I 0.548
Bostr.10689s0053 Boechera stricta Bostr.10689s0053 I 0.548
Gorai.011G067500 Gossypium raimondii Gorai.011G067500 I 0.548
gene18689-v1.0-hybrid Fragaria vesca gene18689-v1.0-hybrid I 0.548
Carubv10007153m.g Capsella rubella Carubv10007153m.g I 0.548
DAG2 Arabidopsis lyrata scaffold_403629.1 I 0.548
Pm018337 Prunus mume Pm018337 I 0.548
Bo2g168270 Brassica oleracea Bo2g168270 I 0.548
TCM_005109 Theobroma cacao TCM_005109 I 0.548
Bra035956 Brassica rapa Bra035956 I 0.548
Bo3g181400 Brassica oleracea Bo3g181400 I 0.548
Gorai.008G126800 Gossypium raimondii Gorai.008G126800 I 0.548
Bra037135 Brassica rapa Bra037135 I 0.548
GSMUA_Achr10G08280_001 Musa acuminata GSMUA_Achr10G08280_001 I 0.548
Thhalv10001503m.g Eutrema salsugineum Thhalv10001503m.g I 0.548
SapurV1A.0498s0050 Salix purpurea SapurV1A.0498s0050 I 0.548
SapurV1A.0094s0030 Salix purpurea SapurV1A.0094s0030 I 0.548
MTR_2g014060 Medicago truncatula MTR_2g014060 I 0.548
DOF2.5 Arabidopsis thaliana AT2G46590 D 0.548
Bo9g014360 Brassica oleracea Bo9g014360 I 0.548
Cucsa.304130 Cucumis sativus Cucsa.304130 I 0.548
GSMUA_Achr2G13350_001 Musa acuminata GSMUA_Achr2G13350_001 I 0.548
SapurV1A.0013s0150 Salix purpurea SapurV1A.0013s0150 I 0.548
GRMZM2G010290 Zea mays GRMZM2G010290 I 0.548
PGSC0003DMG400004062 Solanum tuberosum PGSC0003DMG400004062 I 0.548
MDP0000313040 Malus domestica MDP0000313040 I 0.548
Aquca_002_00949 Aquilegia coerulea Aquca_002_00949 I 0.548
ADOF1 Arabidopsis lyrata fgenesh2_kg.1__4241__AT1G51700.1 I 0.548
DAG1 Arabidopsis lyrata fgenesh2_kg.5__2679__AT3G61850.1 I 0.548
Pavir.Ba01771 Panicum virgatum Pavir.Ba01771 I 0.548
Bo7g107280 Brassica oleracea Bo7g107280 I 0.524
Cucsa.349890 Cucumis sativus Cucsa.349890 I 0.524
mgf022004m Mimulus guttatus mgf022004m I 0.524
Ciclev10021278m.g Citrus clementina Ciclev10021278m.g I 0.524
Ciclev10026061m.g Citrus clementina Ciclev10026061m.g I 0.524
Aquca_015_00212 Aquilegia coerulea Aquca_015_00212 I 0.524
Lus10035955.g Linum usitatissimum Lus10035955.g I 0.524
MDP0000771149 Malus domestica MDP0000771149 I 0.524
MDP0000255023 Malus domestica MDP0000255023 I 0.524
MDP0000255017 Malus domestica MDP0000255017 I 0.524
orange1.1g021633m.g Citrus sinensis orange1.1g021633m.g I 0.524
SapurV1A.0011s0080 Salix purpurea SapurV1A.0011s0080 I 0.524
chr2.CM0177.80.nd Lotus japonicus chr2.CM0177.80.nd I 0.524
PK07031.1 Cannabis sativa PK07031.1 D 0.524
MDP0000241840 Malus domestica MDP0000241840 I 0.524
Cucsa.098430 Cucumis sativus Cucsa.098430 I 0.524
gene26135-v1.0-hybrid Fragaria vesca gene26135-v1.0-hybrid I 0.524
Bo1g023750 Brassica oleracea Bo1g023750 I 0.524
evm.TU.contig_34071 Carica papaya evm.TU.contig_34071 I 0.524
Gorai.003G103100 Gossypium raimondii Gorai.003G103100 I 0.524
Gorai.005G105200 Gossypium raimondii Gorai.005G105200 I 0.524
Lus10025707.g Linum usitatissimum Lus10025707.g I 0.524
Gorai.011G104200 Gossypium raimondii Gorai.011G104200 I 0.524
Eucgr.F03105 Eucalyptus grandis Eucgr.F03105 I 0.524
Ca_10106 Cicer arietinum Ca_10106 I 0.524
PGSC0003DMG400000786 Solanum tuberosum PGSC0003DMG400000786 I 0.524
PGSC0003DMG400010027 Solanum tuberosum PGSC0003DMG400010027 I 0.524
GLYMA01G02610 Glycine max GLYMA01G02610 I 0.524
GLYMA04G35650 Glycine max GLYMA04G35650 I 0.524
GLYMA05G02220 Glycine max GLYMA05G02220 I 0.524
PGSC0003DMG400021361 Solanum tuberosum PGSC0003DMG400021361 I 0.524
PGSC0003DMG400027089 Solanum tuberosum PGSC0003DMG400027089 I 0.524
PRUPE_ppa008556mg Prunus persica PRUPE_ppa008556mg I 0.524
POPTR_0015s08810 Populus trichocarpa POPTR_0015s08810 I 0.524
POPTR_0012s08280 Populus trichocarpa POPTR_0012s08280 I 0.524
POPTR_0007s11620 Populus trichocarpa POPTR_0007s11620 I 0.524
GLYMA16G26030 Glycine max GLYMA16G26030 I 0.524
GLYMA17G09710 Glycine max GLYMA17G09710 I 0.524
MNB1A Zea mays MNB1A_MAIZE D 0.524
MTR_2g096740 Medicago truncatula MTR_2g096740 I 0.524
LPERR03G21700 Leersia perrieri LPERR03G21700 I 0.524
GSMUA_Achr2G15700_001 Musa acuminata GSMUA_Achr2G15700_001 I 0.524
GSMUA_AchrUn_randomG13230_001 Musa acuminata GSMUA_AchrUn_randomG13230_001 I 0.524
MTR_3g077750 Medicago truncatula MTR_3g077750 I 0.524
MTR_5g031440 Medicago truncatula MTR_5g031440 I 0.524
GRMZM2G061292 Zea mays GRMZM2G061292 I 0.524
GRMZM2G449950 Zea mays GRMZM2G449950 I 0.524
MTR_8g479350 Medicago truncatula MTR_8g479350 I 0.524
MTR_8g015840 Medicago truncatula MTR_8g015840 I 0.524
cassava45186.m1 Manihot esculenta cassava45186.m1 I 0.524
PRUPE_ppa015648mg Prunus persica PRUPE_ppa015648mg I 0.524
GSMUA_Achr3G10670_001 Musa acuminata GSMUA_Achr3G10670_001 I 0.524
Ca_11553 Cicer arietinum Ca_11553 I 0.524
Ca_09238 Cicer arietinum Ca_09238 I 0.524
Bo9g141200 Brassica oleracea Bo9g141200 I 0.524
Bra004525 Brassica rapa Bra004525 I 0.524
Cla000993 Citrullus lanatus Cla000993 I 0.524
Cla011526 Citrullus lanatus Cla011526 I 0.524
30147.m013945 Ricinus communis 30147.m013945 I 0.524
cassava17627.valid.m1 Manihot esculenta cassava17627.valid.m1 I 0.524
Pm026481 Prunus mume Pm026481 I 0.524
Pm024734 Prunus mume Pm024734 I 0.524
Pm019710 Prunus mume Pm019710 I 0.524
PRUPE_ppa018553mg Prunus persica PRUPE_ppa018553mg I 0.524
HCA2 Vitis vinifera VIT_17s0000g08290 I 0.524
Bra014297 Brassica rapa Bra014297 I 0.524
Solyc03g112930.2 Solanum lycopersicum Solyc03g112930.2 I 0.524
Bra027722 Brassica rapa Bra027722 I 0.524
Sb08g000330 Sorghum bicolor Sb08g000330 I 0.524
AMTR_s00006p00248860 Amborella trichopoda AMTR_s00006p00248860 I 0.524
Solyc04g070960.1 Solanum lycopersicum Solyc04g070960.1 I 0.524
Solyc06g071480.2 Solanum lycopersicum Solyc06g071480.2 I 0.524
Traes_4AL_573E93FCC Triticum aestivum Traes_4AL_573E93FCC I 0.524
TCM_014374 Theobroma cacao TCM_014374 I 0.524
TCM_012077 Theobroma cacao TCM_012077 I 0.524
Traes_4BS_4B1025766 Triticum aestivum Traes_4BS_4B1025766 I 0.524
SapurV1A.0012s0460 Salix purpurea SapurV1A.0012s0460 I 0.519
PGSC0003DMG400005798 Solanum tuberosum PGSC0003DMG400005798 I 0.508