CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.scaffold_22000226
(
Physcomitrella patens
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02701 (zf-Dof)
IPR003851
fgenesh1_pg.scaffold_22000226
T171540_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_22000226
Dof
394
443
IPKECPRCNSKEVKFKYFNNKKLNQPRYQCLSCKDFFTHGGKKLATEAAS
fgenesh1_pg.scaffold_22000226
Dof
485
529
MEKLCRKCGSKNTAFKYLNNGQLDQPRYKCLDCKGMFQLHNKRVR
fgenesh1_pg.scaffold_22000226
Dof
589
643
VVKPCPSCKKTKTRFKYFNNKNMKQPRYECLDCHQYFTYKTEFNQVNSGAFGGDQ
Links
Other
Dof
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_220220
Physcomitrella patens
estExt_fgenesh1_pg.C_220220
N
1.000