fgeneshCV_pg.C_scaffold_10000045 (Chlorella vulgaris)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 fgeneshCV_pg.C_scaffold_10000045 T174107_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.481 0.481
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.481 0.481
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.481 0.481
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.451 0.451
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.451 0.451
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.451 0.451
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.451 0.451
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.451 0.451
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.451 0.451
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshCV_pg.C_scaffold_10000045 E2F 245 310
fgeneshCV_pg.C_scaffold_10000045 E2F 368 448

Links

Other E2F family TFs
Other Chlorella vulgaris TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.11_#_43 Coccomyxa subellipsoidea C169 fgenesh1_pg.11_#_43 I 1.000
IGS.gm_21_00108 Chlorella NC64A IGS.gm_21_00108 N 0.570
E2f8 Mus musculus ENSMUSG00000046179 I 0.481
GUITHDRAFT_133924 Guillardia theta GUITHDRAFT_133924 I 0.481
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.478
EuGene.0000050713 Micromonas pusilla EuGene.0000050713 I 0.478
EuGene.0800010516 Micromonas sp RCC299 EuGene.0800010516 I 0.478
CMT433C Cyanidioschyzon merolae CMT433C I 0.474
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.474
E2F8 Bos taurus ENSBTAG00000017446 I 0.474
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.474
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.474
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I 0.474
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.471
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.471
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.471
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.471
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.471
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.471
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.471
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.471
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.471
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.471
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.471
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.471
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.471
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.471
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.471
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.471
Tal_R008430 Tyto alba Tal_R008430 I 0.471
fgenesh1_pg.scaffold_172000049 Physcomitrella patens fgenesh1_pg.scaffold_172000049 I 0.471
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.471
Aan_R006648 Calypte anna Aan_R006648 I 0.471
E2F8 Sus scrofa ENSSSCG00000013352 I 0.471
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.471
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.471
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.471
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.471
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.471
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.471
E2F8 Canis familiaris ENSCAFG00000009431 I 0.471
E2F8 Homo sapiens ENSG00000129173 D 0.471
E2F8 Felis catus ENSFCAG00000010706 I 0.471
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.471
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.471
E2f8 Dipodomys ordii ENSDORG00000000040 I 0.471
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.471
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.471
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.471
e2f7.L Xenopus laevis XB-GENE-1018449 I 0.466
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.466
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.466
E2F8 Callithrix jacchus ENSCJAG00000006811 I 0.463
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.463
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.463
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.463
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I 0.463
ENSCING00000014484 Ciona intestinalis ENSCING00000014484 I 0.463
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.463
Pvit_06409 Pogona vitticeps Pvit_06409 I 0.463
fgenesh2_pg.scaffold_132000019 Physcomitrella patens fgenesh2_pg.scaffold_132000019 I 0.463
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.463
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.463
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.463
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.459
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.459
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I 0.459
fgenesh1_pg.scaffold_121000063 Physcomitrella patens fgenesh1_pg.scaffold_121000063 I 0.458
E2F8 Procavia capensis ENSPCAG00000003996 I 0.457
e2f8 Danio rerio ENSDARG00000057323 I 0.456
E2F8 Taeniopygia guttata ENSTGUG00000015857 I 0.456
CAOG_00276 Capsaspora owczarzaki CAOG_00276 I 0.456
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.456
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I 0.456
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.456
e2f8 Oryzias latipes ENSORLG00000000786 I 0.456
Ocbimv22037571m.g Octopus bimaculoides Ocbimv22037571m.g I 0.456
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.456
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.456
e2f7 Xenopus tropicalis XB-GENE-1018445 I 0.456
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.456
Gfo_R003950 Geospiza fortis Gfo_R003950 I 0.456
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I 0.453
E2F8 Tupaia belangeri ENSTBEG00000005521 I 0.452
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I 0.451
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.451
E2F7 Procavia capensis ENSPCAG00000000596 I 0.451
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.451
maker-pir_contig_104-fgenesh-gene-0.11 Pythium irregulare maker-pir_contig_104-fgenesh-gene-0.11 I 0.449
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I 0.449
XP_002942881 Xenopus tropicalis XP_002942881 I 0.449
e2f7 Takifugu rubripes ENSTRUG00000001843 I 0.449
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.449
Aan_R005623 Calypte anna Aan_R005623 I 0.449
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.449
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.449
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.449
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.449
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.449
SELMODRAFT_451530 Selaginella moellendorffii SELMODRAFT_451530 I 0.449
Tal_R000495 Tyto alba Tal_R000495 I 0.449
SELMODRAFT_421405 Selaginella moellendorffii SELMODRAFT_421405 I 0.449
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I 0.449
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.449
ENSORLG00000012301 Oryzias latipes ENSORLG00000012301 I 0.449
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I 0.449
e2f7 Tetraodon nigroviridis ENSTNIG00000005126 I 0.449
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.449
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.449
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I 0.449
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.449
E2F8 Ochotona princeps ENSOPRG00000012881 I 0.448
fgenesh_scip_prom.28083.1342 Phytophthora lateralis fgenesh_scip_prom.28083.1342 I 0.445
LPERR06G08240 Leersia perrieri LPERR06G08240 I 0.444
LotgiG168338 Lottia gigantea LotgiG168338 I 0.444
Sb10g008800 Sorghum bicolor Sb10g008800 I 0.444
E2F8 Vicugna pacos ENSVPAG00000012423 I 0.442
E2F7 Bos taurus ENSBTAG00000016931 I 0.441
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I 0.441
E2F7 Echinops telfairi ENSETEG00000014750 I 0.441
E2F7 Otolemur garnettii ENSOGAG00000010821 I 0.441
E2F7 Ochotona princeps ENSOPRG00000001896 I 0.441
ENSP00000323246 Macaca fascicularis ENSP00000323246 I 0.441
ENSAPLG00000014506 Anas platyrhynchos ENSAPLG00000014506 I 0.441
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.441
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I 0.441
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I 0.441
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.441
E2F7 Meleagris gallopavo ENSMGAG00000010943 I 0.441
evm.TU.supercontig_35.34 Carica papaya evm.TU.supercontig_35.34 I 0.441
Pavir.Db01700 Panicum virgatum Pavir.Db01700 I 0.441
E2F7 Gorilla gorilla ENSGGOG00000012645 I 0.441
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.441
E2F7 Homo sapiens ENSG00000165891 D 0.441
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I 0.441
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.441
E2f7 Mus musculus ENSMUSG00000020185 D 0.441
E2F7 Felis catus ENSFCAG00000010756 I 0.441
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.441
E2F7 Macaca mulatta ENSMMUG00000022846 I 0.441
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I 0.441
E2F8 Equus caballus ENSECAG00000016457 I 0.441
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I 0.441
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I 0.441
E2F7 Cavia porcellus ENSCPOG00000007375 I 0.441
E2F7 Sus scrofa ENSSSCG00000000950 I 0.441
E2F7 Tursiops truncatus ENSTTRG00000000110 I 0.441
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I 0.441
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.441
ENSGALG00000010265 Gallus gallus ENSGALG00000010265 I 0.441
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.441
GRMZM2G060000 Zea mays GRMZM2G060000 I 0.441
E2F7 Tupaia belangeri ENSTBEG00000005417 I 0.441
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I 0.441
Si006412m.g Setaria italica Si006412m.g I 0.441
E2F7 Pan troglodytes ENSPTRG00000005245 I 0.441
E2F7 Callithrix jacchus ENSCJAG00000019162 I 0.441
E2F7 Pteropus vampyrus ENSPVAG00000000288 I 0.441
E2f7 Rattus norvegicus ENSRNOG00000026252 I 0.441
TCM_011971 Theobroma cacao TCM_011971 I 0.441
PYU1_G013070 Pythium ultimum PYU1_G013070 I 0.441
E2F7 Sorex araneus ENSSARG00000004122 I 0.441
Pavir.Da01202 Panicum virgatum Pavir.Da01202 I 0.440
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.436
Bostr.18473s0137 Boechera stricta Bostr.18473s0137 I 0.436
Cagra.4239s0004 Capsella grandiflora Cagra.4239s0004 I 0.436
Carubv10018365m.g Capsella rubella Carubv10018365m.g I 0.436
TCM_017926 Theobroma cacao TCM_017926 I 0.436
GLYMA06G19843 Glycine max GLYMA06G19843 I 0.436
CGI_10023548 Crassostrea gigas CGI_10023548 I 0.434
Aquca_025_00187 Aquilegia coerulea Aquca_025_00187 I 0.434
Gorai.004G114000 Gossypium raimondii Gorai.004G114000 I 0.434
GLYMA05G01760 Glycine max GLYMA05G01760 I 0.434
E2F7 Canis familiaris ENSCAFG00000005718 I 0.434
maker-piw_contig_1993-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1993-fgenesh-gene-0.1 I 0.434
F443_02115 Phytophthora parasitica F443_02115 I 0.434
MLOC_67050 Hordeum vulgare MLOC_67050 I 0.434
F775_15908 Aegilops tauschii F775_15908 I 0.434
maker-pve_contig_484-snap-gene-0.19 Pythium vexans maker-pve_contig_484-snap-gene-0.19 I 0.434
TTHERM_01076950 Tetrahymena thermophila TTHERM_01076950 I 0.430
PDK_20s1335201g002 Phoenix dactylifera PDK_20s1335201g002 I 0.429
Cucsa.197250 Cucumis sativus Cucsa.197250 I 0.429
OBART06G09260 Oryza barthii OBART06G09260 I 0.429
OB02G38920 Oryza brachyantha OB02G38920 I 0.429
GRMZM2G378665 Zea mays GRMZM2G378665 I 0.429
cassava17583.valid.m1 Manihot esculenta cassava17583.valid.m1 I 0.429
Cucsa.098190 Cucumis sativus Cucsa.098190 I 0.429