Ogr00083 (Ophisaurus gracilis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) Ogr00083 T174828_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.714 0.714
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.714 0.714
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.714 0.714
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr00083 EBF1 13 68

Links

Other EBF1 family TFs
Other Ophisaurus gracilis TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pvit_12666 Pogona vitticeps Pvit_12666 I 1.000
EBF4 Macaca mulatta ENSMMUG00000021331 I 1.000
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 1.000
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I 0.946
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.925
EBF1 Equus caballus ENSECAG00000007964 I 0.925
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.925
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.925
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.925
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.925
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
HMEL014948 Heliconius melpomene HMEL014948 I 0.821
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.821
estExt_gwp.C_3810003 Branchiostoma floridae estExt_gwp.C_3810003 I 0.814
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.812
MCINX016126 Melitaea cinxia MCINX016126 I 0.750
GH12956 Drosophila grimshawi FBgn0120434 I 0.750
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.714
EBF1 Sus scrofa ENSSSCG00000017046 I 0.714
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.714
EBF1 Tupaia belangeri ENSTBEG00000007800 I 0.714
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.714
ENSSHAG00000018391 Sarcophilus harrisii ENSSHAG00000018391 I 0.714
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.714
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.714
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.714
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.714
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.714
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.714
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.714
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.714
Aan_R013029 Calypte anna Aan_R013029 I 0.714
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.714
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.714
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.714
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.714
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.714
Pvit_11383 Pogona vitticeps Pvit_11383 I 0.714
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.714
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.714
ENSTSYG00000007975 Tarsius syrichta ENSTSYG00000007975 I 0.714
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.714
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.714
EBF1 Homo sapiens ENSG00000164330 D 0.714
EBF3 Homo sapiens ENSG00000108001 D 0.714
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.714
EBF3 Gallus gallus ENSGALG00000010461 I 0.714
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I 0.714
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.714
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I 0.714
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.714
EBF3 Bos taurus ENSBTAG00000008272 I 0.714
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.714
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.714
EBF3 Canis familiaris ENSCAFG00000013267 I 0.714
EBF1 Canis familiaris ENSCAFG00000017318 I 0.714
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I 0.714
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.714
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.714
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.714
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.714
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.714
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.714
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.714
ebf3a Oryzias latipes ENSORLG00000005870 I 0.714
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.714
EBF4 Oryzias latipes ENSORLG00000020414 I 0.714
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.714
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.714
EBF1 Microcebus murinus ENSMICG00000010036 I 0.714
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I 0.714
Ebf3 Mus musculus ENSMUSG00000010476 I 0.714
EBF3 Myotis lucifugus ENSMLUG00000005478 I 0.714
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I 0.714
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.714
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.714
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
ADAC003479 Anopheles darlingi ADAC003479 I 0.703