maker-nMf.1.1.scaf01942-snap-gene-0.10 (Meloidogyne floridensis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) maker-nMf.1.1.scaf01942-snap-gene-0.10 T174942_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.781 0.781
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.781 0.781
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.781 0.781
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.754 0.754
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.754 0.754
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.754 0.754
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.737 0.737
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf01942-snap-gene-0.10-mRNA-1 EBF1 4 117

Links

Other EBF1 family TFs
Other Meloidogyne floridensis TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SINV26263 Solenopsis invicta SINV26263 I 0.917
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.889
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.846
RPRC005513 Rhodnius prolixus RPRC005513 I 0.786
ebf1a Danio rerio ENSDARG00000099849 I 0.781
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.781
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.781
EBF1 Tupaia belangeri ENSTBEG00000007800 I 0.781
L889_g1820 Steinernema feltiae L889_g1820 I 0.781
L893_g31120 Steinernema glaseri L893_g31120 I 0.781
L898_g8304 Steinernema monticolum L898_g8304 I 0.781
ebf1b Danio rerio ENSDARG00000069196 I 0.772
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.772
LOAG_18199 Loa loa LOAG_18199 I 0.772
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.772
ANCCAN_06536 Ancylostoma caninum ANCCAN_06536 I 0.772
GPLIN_000159400 Globodera pallida GPLIN_000159400 I 0.772
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.772
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.763
ebf2.S Xenopus laevis XB-GENE-971141 I 0.763
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.763
ACAC_0000654401 Angiostrongylus cantonensis ACAC_0000654401 I 0.758
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.754
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.754
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.754
EBF2 Bos taurus ENSBTAG00000040390 I 0.754
EBF2 Canis familiaris ENSCAFG00000008918 I 0.754
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.754
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.754
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.754
EBF3 Homo sapiens ENSG00000108001 D 0.754
EBF2 Homo sapiens ENSG00000221818 D 0.754
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.754
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.754
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.754
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.754
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.754
Ebf3 Mus musculus ENSMUSG00000010476 I 0.754
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.754
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.754
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.754
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.754
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.754
EBF4 Oryzias latipes ENSORLG00000020414 I 0.754
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.754
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.754
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.754
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.754
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.754
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.754
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.754
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.754
EBF2 Sus scrofa ENSSSCG00000009655 I 0.754
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.754
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.754
GL10656 Drosophila persimilis FBgn0148266 I 0.754
GK23295 Drosophila willistoni FBgn0225257 I 0.754
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.754
KGM_09934 Danaus plexippus KGM_09934 I 0.754
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.754
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.754
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.754
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.754
MDOA011385 Musca domestica MDOA011385 I 0.754
CBG07590 Caenorhabditis briggsae CBG07590 I 0.746
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.746
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.746
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.746
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.746
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.746
EBF2 Gallus gallus ENSGALG00000000242 I 0.746
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.746
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.746
ebf3a Oryzias latipes ENSORLG00000005870 I 0.746
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.746
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.746
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.746
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.746
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.746
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.746
GF11778 Drosophila ananassae FBgn0088818 I 0.746
GJ21945 Drosophila virilis FBgn0209060 I 0.746
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.746
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.737
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.737
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.737
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I 0.737
EBF3 Echinops telfairi ENSETEG00000014060 I 0.737
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.737
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.737
Ebf4 Mus musculus ENSMUSG00000053552 D 0.737
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I 0.737
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.737
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.737
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.737
HelroG112029 Helobdella robusta HelroG112029 I 0.737
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.737
csin100403 Clonorchis sinensis csin100403 N 0.737
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.737
T265_13606 Opisthorchis viverrini T265_13606 N 0.737
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.733
EBF4 Echinops telfairi ENSETEG00000015956 I 0.728
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I 0.728
LotgiG225788 Lottia gigantea LotgiG225788 I 0.728
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.728
HelroG143625 Helobdella robusta HelroG143625 I 0.719
TTAC_0000009401 Hydatigera taeniaeformis TTAC_0000009401 I 0.719
NEMVEDRAFT_v1g164975 Nematostella vectensis NEMVEDRAFT_v1g164975 N 0.702