CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15018056
(
Schmidtea mediterranea
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00178 (Ets)
IPR000418
SMU15018056
T178038_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ets98B
M03727_2.00
Drosophila melanogaster
TAMCGGATGCN
NGCATCCGKTA
SELEX
Nitta et al.(2015)
Ets98B_1
0.743
0.432
Ets98B
M03728_2.00
Drosophila melanogaster
TKGCGGATGCN
NGCATCCGCMA
SELEX
Nitta et al.(2015)
Ets98B_2
0.743
0.432
Ets98B
M03729_2.00
Drosophila melanogaster
ATGATCCGGGACN
NGTCCCGGATCAT
SELEX
Nitta et al.(2015)
Ets98B_3
0.743
0.432
Ets98B
M03730_2.00
Drosophila melanogaster
GSATMCGKTA
TAMCGKATSC
SELEX
Nitta et al.(2015)
Ets98B_4
0.743
0.432
Ets98B
M03731_2.00
Drosophila melanogaster
ATGATCCGGGASN
NSTCCCGGATCAT
SELEX
Nitta et al.(2015)
Ets98B_5
0.743
0.432
Ets98B
M06191_2.00
Drosophila melanogaster
ASCCGGAWC
GWTCCGGST
B1H
Zhu et al.(2011)
Ets98B_SANGER_10_FBgn0005659
0.743
0.432
Spdef
M00159_2.00
Mus musculus
NNVMGGAHNN
NNDTCCKBNN
PBM
Badis et al.(2009)
Spdef_0905
0.735
0.420
Spdef
M01488_2.00
Mus musculus
NDNVMGGAHN
NDTCCKBNHN
PBM
Wei et al.(2010)
Spdef
0.735
0.420
SPDEF
M02973_2.00
Homo sapiens
AMCCGGATRTD
HAYATCCGGKT
SELEX
Jolma et al.(2013)
SPDEF_1
0.735
0.420
SPDEF
M02974_2.00
Homo sapiens
ATRATCCGGGAMMHY
RDKKTCCCGGATYAT
SELEX
Jolma et al.(2013)
SPDEF_2
0.735
0.420
SPDEF
M02975_2.00
Homo sapiens
RCAGDAAGAAGTAWWM
KWWTACTTCTTHCTGY
SELEX
Jolma et al.(2013)
SPDEF_3
0.735
0.420
SPDEF
M02976_2.00
Homo sapiens
AMCCGGATRTD
HAYATCCGGKT
SELEX
Jolma et al.(2013)
SPDEF_4
0.735
0.420
SPDEF
M02977_2.00
Homo sapiens
WTRATCCGGGACCMC
GKGGTCCCGGATYAW
SELEX
Jolma et al.(2013)
SPDEF_5
0.735
0.420
SPDEF
M02978_2.00
Homo sapiens
RCAGDAAGAMGTAWHM
KDWTACKTCTTHCTGY
SELEX
Jolma et al.(2013)
SPDEF_6
0.735
0.420
SPDEF
M04748_2.00
Homo sapiens
NWVCCGGATRYN
NRYATCCGGBWN
SELEX
Yin et al.(2017)
SPDEF_eDBD_HT-SELEX
0.735
0.420
SPDEF
M04750_2.00
Homo sapiens
NWVCCGGATRYN
NRYATCCGGBWN
SELEX
Yin et al.(2017)
SPDEF_FL_HT-SELEX
0.735
0.420
SPDEF
M09530_2.00
Homo sapiens
WVCMGGAWVY
RBWTCCKGBW
Misc
Heinz et al.(2010)
VCaP-SPDEF_SRA014231
0.735
0.420
SPDEF
M04749_2.00
Homo sapiens
NAVCMGGATRYD
HRYATCCKGBTN
SELEX
Yin et al.(2017)
SPDEF_eDBD_Methyl-HT-SELEX
0.735
0.420
SPDEF
M04751_2.00
Homo sapiens
NAVCMGKATRYD
HRYATMCKGBTN
SELEX
Yin et al.(2017)
SPDEF_FL_Methyl-HT-SELEX
0.735
0.420
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15018056
Ets
59
139
YLWQILLTMLFNKHCSPYIHWTDYESGMFKIKDPHSVSIIWGESKGNRNMTYDKMSRSMRQYYKSNLLKKTNHDKLNYCFN
Links
Other
Ets
family TFs
Other
Schmidtea mediterranea
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMU15034613
Schmidtea mediterranea
SMU15034613
I
0.997
Sakowv30046418m.g
Saccoglossus kowalevskii
Sakowv30046418m.g
I
0.791
YQE_03066
Dendroctonus ponderosae
YQE_03066
I
0.775
PHUM503640
Pediculus humanus
PHUM503640
I
0.773
SNAPOd2T00009984001
Oikopleura dioica
SNAPOd2T00009984001
I
0.772
HelroG127646
Helobdella robusta
HelroG127646
I
0.771
Ocbimv22034220m.g
Octopus bimaculoides
Ocbimv22034220m.g
I
0.770
BGLB000499
Biomphalaria glabrata
BGLB000499
I
0.763
SPU_008528
Strongylocentrotus purpuratus
SPU_008528
I
0.762
e_gw.6.372.1
Branchiostoma floridae
e_gw.6.372.1
I
0.762
fgenesh2_pg.scaffold_297000075
Branchiostoma floridae
fgenesh2_pg.scaffold_297000075
I
0.762
L798_11858
Zootermopsis nevadensis
L798_11858
I
0.761
L596_g17057
Steinernema carpocapsae
L596_g17057
I
0.757
SPDEF
Takifugu rubripes
ENSTRUG00000011048
I
0.755
SPDEF
Tetraodon nigroviridis
ENSTNIG00000001703
I
0.755
fgenesh2_pg.scaffold_167000085
Branchiostoma floridae
fgenesh2_pg.scaffold_167000085
I
0.752
CapteG171657
Capitella teleta
CapteG171657
I
0.745
BGIBMGA001296
Bombyx mori
BGIBMGA001296
I
0.745
MDOA013732
Musca domestica
MDOA013732
I
0.745
LCUP001713
Lucilia cuprina
LCUP001713
I
0.745
KGM_21536
Danaus plexippus
KGM_21536
I
0.745
TC008243
Tribolium castaneum
TC008243
I
0.743
tetur10g01220
Tetranychus urticae
tetur10g01220
I
0.743
ISCW005284
Ixodes scapularis
ISCW005284
I
0.743
GK11770
Drosophila willistoni
FBgn0213781
I
0.743
AAEL005147
Aedes aegypti
AAEL005147
I
0.743
GD21351
Drosophila simulans
FBgn0192788
I
0.743
GM16357
Drosophila sechellia
FBgn0171272
I
0.743
GE23760
Drosophila yakuba
FBgn0240917
I
0.743
GA27000
Drosophila pseudoobscura
FBgn0248371
I
0.743
RPRC004402
Rhodnius prolixus
RPRC004402
I
0.743
NV12052
Nasonia vitripennis
NV12052
I
0.743
GB50829
Apis mellifera
GB50829
I
0.743
SMAR015178
Strigamia maritima
SMAR015178
I
0.743
CLEC002637
Cimex lectularius
CLEC002637
I
0.743
AMIN004239
Anopheles minimus
AMIN004239
I
0.743
AMEM008533
Anopheles merus
AMEM008533
I
0.743
AMEC015581
Anopheles melas
AMEC015581
I
0.743
AMAM008021
Anopheles maculatus
AMAM008021
I
0.743
AQUA002229
Anopheles quadriannulatus
AQUA002229
I
0.743
ASIS007112
Anopheles sinensis
ASIS007112
I
0.743
PPAI004682
Phlebotomus papatasi
PPAI004682
I
0.743
LLOJ008642
Lutzomyia longipalpis
LLOJ008642
I
0.743
ASTEI04247
Anopheles stephensi
ASTEI04247
I
0.743
AFUN007103
Anopheles funestus
AFUN007103
I
0.743
AFAF002698
Anopheles farauti
AFAF002698
I
0.743
AARA006222
Anopheles arabiensis
AARA006222
I
0.743
AALB004027
Anopheles albimanus
AALB004027
I
0.743
GL13714
Drosophila persimilis
FBgn0151319
I
0.743
Hsal_06802--XP_396511.3_APIME
Harpegnathos saltator
Hsal_06802--XP_396511.3_APIME
I
0.743
AATE008235
Anopheles atroparvus
AATE008235
I
0.743
ACOM037974
Anopheles coluzzii
ACOM037974
I
0.743
AEPI002241
Anopheles epiroticus
AEPI002241
I
0.743
ADIR002130
Anopheles dirus
ADIR002130
I
0.743
ACUA005433
Anopheles culicifacies
ACUA005433
I
0.743
Cflo_02996--XP_396511.3_APIME
Camponotus floridanus
Cflo_02996--XP_396511.3_APIME
I
0.743
GJ10475
Drosophila virilis
FBgn0197755
I
0.743
ACEP13202
Atta cephalotes
ACEP13202
I
0.743
AGAP011341
Anopheles gambiae
AGAP011341
I
0.743
Ets98B
Drosophila melanogaster
FBgn0005659
D
0.743
GI22028
Drosophila mojavensis
FBgn0144757
I
0.743
GF16302
Drosophila ananassae
FBgn0093324
I
0.743
GH16564
Drosophila grimshawi
FBgn0124035
I
0.743
GG11574
Drosophila erecta
FBgn0103871
I
0.743
DAPPUDRAFT_8447
Daphnia pulex
DAPPUDRAFT_8447
I
0.742
ENSGMOG00000000105
Gadus morhua
ENSGMOG00000000105
I
0.735
spdef
Xenopus tropicalis
XB-GENE-491205
I
0.735
SPDEF
Gallus gallus
ENSGALG00000002792
I
0.735
ENSLACG00000017022
Latimeria chalumnae
ENSLACG00000017022
I
0.735
SPDEF
Gorilla gorilla
ENSGGOG00000000383
I
0.735
SPDEF
Microcebus murinus
ENSMICG00000013437
I
0.735
ENSMMUG00000007812
Macaca mulatta
ENSMMUG00000007812
I
0.735
ENSGACG00000004912
Gasterosteus aculeatus
ENSGACG00000004912
I
0.735
SPDEF
Myotis lucifugus
ENSMLUG00000025914
I
0.735
ENSLOCG00000009979
Lepisosteus oculatus
ENSLOCG00000009979
I
0.735
SPDEF
Loxodonta africana
ENSLAFG00000002253
I
0.735
Spdef
Dipodomys ordii
ENSDORG00000016134
I
0.735
SPDEF
Canis familiaris
ENSCAFG00000001227
I
0.735
SPDEF
Callithrix jacchus
ENSCJAG00000015294
I
0.735
SPDEF
Bos taurus
ENSBTAG00000021993
I
0.735
ENSAMXG00000016751
Astyanax mexicanus
ENSAMXG00000016751
I
0.735
SPDEF
Anolis carolinensis
ENSACAG00000015770
I
0.735
SPDEF
Cavia porcellus
ENSCPOG00000020697
I
0.735
ENSCSAG00000009798
Chlorocebus sabaeus
ENSCSAG00000009798
I
0.735
SPDEF
Felis catus
ENSFCAG00000015357
I
0.735
SPDEF
Echinops telfairi
ENSETEG00000005883
I
0.735
SPDEF
Equus caballus
ENSECAG00000021717
I
0.735
SPDEF
Monodelphis domestica
ENSMODG00000013916
I
0.735
SPDEF
Homo sapiens
ENSG00000124664
D
0.735
Spdef
Mus musculus
ENSMUSG00000024215
D
0.735
ENSPSIG00000004860
Pelodiscus sinensis
ENSPSIG00000004860
I
0.735
SPDEF
Pan troglodytes
ENSPTRG00000018065
I
0.735
ENSPPYG00000016518
Pongo abelii
ENSPPYG00000016518
I
0.735
ENSPFOG00000015137
Poecilia formosa
ENSPFOG00000015137
I
0.735
ENSMPUG00000003167
Mustela putorius furo
ENSMPUG00000003167
I
0.735
SPDEF
Pteropus vampyrus
ENSPVAG00000015594
I
0.735
Spdef
Rattus norvegicus
ENSRNOG00000000491
I
0.735
SPDEF
Tursiops truncatus
ENSTTRG00000007816
I
0.735
ENSSTOG00000028807
Ictidomys tridecemlineatus
ENSSTOG00000028807
I
0.735
ENSSHAG00000004899
Sarcophilus harrisii
ENSSHAG00000004899
I
0.735
ENSSARG00000011301
Sorex araneus
ENSSARG00000011301
I
0.735
ENSONIG00000014752
Oreochromis niloticus
ENSONIG00000014752
I
0.735
ENSPANG00000016482
Papio anubis
ENSPANG00000016482
I
0.735
SPDEF
Otolemur garnettii
ENSOGAG00000011260
I
0.735
ENSNLEG00000008374
Nomascus leucogenys
ENSNLEG00000008374
I
0.735
Myotis_brandtii_SPDEF_10017789
Myotis brandtii
Myotis_brandtii_SPDEF_10017789
I
0.735
Ogr09009
Ophisaurus gracilis
Ogr09009
I
0.735
Pvit_06029
Pogona vitticeps
Pvit_06029
I
0.735
ENSP00000363149
Macaca fascicularis
ENSP00000363149
I
0.735
Aan_R003780
Calypte anna
Aan_R003780
I
0.735
ENSP00000363149-D1
Bos grunniens
ENSP00000363149-D1
I
0.735
Alligator_sinensis_CCG020447.1
Alligator sinensis
Alligator_sinensis_CCG020447.1
I
0.735
Cmyd_10011181
Chelonia mydas
Cmyd_10011181
I
0.735
Sakowv30001869m.g
Saccoglossus kowalevskii
Sakowv30001869m.g
I
0.734
ENSSSCG00000024531
Sus scrofa
ENSSSCG00000024531
I
0.734
SPDEF
Ornithorhynchus anatinus
ENSOANG00000008044
I
0.733
ENSAMEG00000000981
Ailuropoda melanoleuca
ENSAMEG00000000981
I
0.733
ML10621a
Mnemiopsis leidyi
ML10621a
I
0.730
CGI_10015192
Crassostrea gigas
CGI_10015192
I
0.720