CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA09G0002200
(
Oryza glaberrima
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
ORGLA09G0002200
T179979_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA09G0002200.1
FAR1
133
162
AHYNRYAKRVGFSIKINTARKSTKDGERDK
Links
Other
FAR1
family TFs
Other
Oryza glaberrima
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022621
Oryza indica
BGIOSGA022621
N
0.933
ORGLA09G0043100
Oryza glaberrima
ORGLA09G0043100
N
0.933
ORGLA09G0017100
Oryza glaberrima
ORGLA09G0017100
N
0.900
ORGLA03G0414700
Oryza glaberrima
ORGLA03G0414700
N
0.900
BGIOSGA030369
Oryza indica
BGIOSGA030369
N
0.900
ORUFI09G02230
Oryza rufipogon
ORUFI09G02230
N
0.767