CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_05s0102g00440
(
Vitis vinifera
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
VIT_05s0102g00440
T180845_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_05s0102g00440.t01
FAR1
78
169
NFYYEYAKRVGFTIRTNRIRHSLKNMAVIGRDFVCSREGFRAAKHTSRKDRVLPPRPITREGCKAMIRLAARDGNKWVVTKFVREHNHKLMT
Links
Other
FAR1
family TFs
Other
Vitis vinifera
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_020038
Theobroma cacao
TCM_020038
N
0.922
POPTR_0007s01950
Populus trichocarpa
POPTR_0007s01950
N
0.911
29569.m000146
Ricinus communis
29569.m000146
N
0.911
cassava17505.valid.m1
Manihot esculenta
cassava17505.valid.m1
N
0.911
Ciclev10021853m.g
Citrus clementina
Ciclev10021853m.g
N
0.900
orange1.1g025623m.g
Citrus sinensis
orange1.1g025623m.g
N
0.900
PRUPE_ppa023771mg
Prunus persica
PRUPE_ppa023771mg
N
0.889
Pm022171
Prunus mume
Pm022171
N
0.889
SapurV1A.0834s0140
Salix purpurea
SapurV1A.0834s0140
N
0.889
evm.TU.supercontig_9.285
Carica papaya
evm.TU.supercontig_9.285
N
0.878
orange1.1g045718m.g
Citrus sinensis
orange1.1g045718m.g
N
0.867
Gorai.011G142100
Gossypium raimondii
Gorai.011G142100
N
0.856