CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm022953
(
Prunus mume
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pm022953
T181000_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm022953
FAR1
61
137
TFYDEYARRLGFSSKVGHSSRSKPDGTTIAREFVCGREGLKRRHADSCDAMLRIELKGQDKWVSTKFVKEHSHALVS
Links
Other
FAR1
family TFs
Other
Prunus mume
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa001395mg
Prunus persica
PRUPE_ppa001395mg
N
0.987
MDP0000150696
Malus domestica
MDP0000150696
N
0.961
MDP0000138209
Malus domestica
MDP0000138209
N
0.935
MDP0000537221
Malus domestica
MDP0000537221
N
0.935
cassava42755.valid.m1
Manihot esculenta
cassava42755.valid.m1
N
0.805
TCM_042009
Theobroma cacao
TCM_042009
N
0.792
Cucsa.142680
Cucumis sativus
Cucsa.142680
N
0.792
Ciclev10018084m.g
Citrus clementina
Ciclev10018084m.g
N
0.792
orange1.1g043648m.g
Citrus sinensis
orange1.1g043648m.g
N
0.792
gene23545-v1.0-hybrid
Fragaria vesca
gene23545-v1.0-hybrid
N
0.779
Gorai.003G140100
Gossypium raimondii
Gorai.003G140100
N
0.753
SapurV1A.0561s0070
Salix purpurea
SapurV1A.0561s0070
N
0.753
SapurV1A.3870s0010
Salix purpurea
SapurV1A.3870s0010
N
0.753
POPTR_0009s16010
Populus trichocarpa
POPTR_0009s16010
N
0.740
POPTR_0004s20710
Populus trichocarpa
POPTR_0004s20710
N
0.714
Gorai.004G227400
Gossypium raimondii
Gorai.004G227400
N
0.701