CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.058440
(
Cucumis sativus
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Cucsa.058440
T181069_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.058440.1
FAR1
93
179
SFYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESTTTVNPRPCMKTGCNASMHIKKREDGKWFVHGFTREHNHEICP
Cucsa.058440.2
FAR1
93
179
SFYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESTTTVNPRPCMKTGCNASMHIKKREDGKWFVHGFTREHNHEICP
Cucsa.058440.3
FAR1
93
179
SFYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESTTTVNPRPCMKTGCNASMHIKKREDGKWFVHGFTREHNHEICP
Links
Other
FAR1
family TFs
Other
Cucumis sativus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA06G00461
Glycine max
GLYMA06G00461
N
0.816
FRS2
Vitis vinifera
VIT_03s0017g01830
N
0.805
Eucgr.A00910
Eucalyptus grandis
Eucgr.A00910
N
0.770
Gorai.001G213700
Gossypium raimondii
Gorai.001G213700
N
0.770
PRUPE_ppa024183mg
Prunus persica
PRUPE_ppa024183mg
N
0.761
Pm014857
Prunus mume
Pm014857
N
0.761
TCM_002031
Theobroma cacao
TCM_002031
N
0.759
MDP0000755159
Malus domestica
MDP0000755159
N
0.759
Bo2g100260
Brassica oleracea
Bo2g100260
N
0.747
Bo4g045820
Brassica oleracea
Bo4g045820
N
0.747
FRS2
Arabidopsis thaliana
AT2G32250
N
0.736
SapurV1A.0154s0250
Salix purpurea
SapurV1A.0154s0250
N
0.736
Solyc07g043260.2
Solanum lycopersicum
Solyc07g043260.2
N
0.724
Cagra.0352s0013
Capsella grandiflora
Cagra.0352s0013
N
0.724
Carubv10022651m.g
Capsella rubella
Carubv10022651m.g
N
0.724
Thhalv10017871m.g
Eutrema salsugineum
Thhalv10017871m.g
N
0.724