CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa03355
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Aa03355
T181659_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa03355.1.p
FAR1
92
196
HFFSFYGFLAGFGVVTTHTVRTTSKKRNGEIVKVEMKCHRYGKEPKQQIKDLEQGVEEPTTEKGAKRKTNVQVRTDCPVVMVVKEIKGIWKVIRLDLDHNHELSP
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia02283
Panicum virgatum
Pavir.Ia02283
N
0.753
Pavir.J32386
Panicum virgatum
Pavir.J32386
N
0.742
Sb01g033000
Sorghum bicolor
Sb01g033000
N
0.730
Pavir.Fb01661
Panicum virgatum
Pavir.Fb01661
N
0.719
Pavir.J06646
Panicum virgatum
Pavir.J06646
N
0.719
Sb09g021205
Sorghum bicolor
Sb09g021205
N
0.719
Pavir.Ea00165
Panicum virgatum
Pavir.Ea00165
N
0.708
Sb04g007236
Sorghum bicolor
Sb04g007236
N
0.708
Sb06g022215
Sorghum bicolor
Sb06g022215
N
0.708