CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Cb01557
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Cb01557
T181696_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb01557.1.p
FAR1
61
145
EFYNSYAKRIGFSVRTSTTRLSGVTREQNKVQFGAEKKKKLDGGKKRKREKMMHIDYRAKMVVKLIAGKWHVINFVPDHNHDLVL
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J00899
Panicum virgatum
Pavir.J00899
N
0.881
Pavir.J08512
Panicum virgatum
Pavir.J08512
N
0.831
Pavir.Ha00557
Panicum virgatum
Pavir.Ha00557
N
0.821
Pavir.Ca02446
Panicum virgatum
Pavir.Ca02446
N
0.774
Pavir.Ga01302
Panicum virgatum
Pavir.Ga01302
N
0.750
Pavir.Fa02303
Panicum virgatum
Pavir.Fa02303
N
0.726
Pavir.J35510
Panicum virgatum
Pavir.J35510
N
0.726
Pavir.Ib01266
Panicum virgatum
Pavir.Ib01266
N
0.702