CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J28938
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.J28938
T181861_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J28938.1.p
FAR1
25
109
KFYCYYAGKAGFDVRKTRTNRKTVAEFSCNKQGHWEFYKPDEERTREKMSMRCECKAFVKAKKNTKKGYWFFERIRLEHSHPLHP
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ib02863
Panicum virgatum
Pavir.Ib02863
N
1.000
Pavir.Da01755
Panicum virgatum
Pavir.Da01755
N
0.976
Si032649m.g
Setaria italica
Si032649m.g
N
0.853
Si039575m.g
Setaria italica
Si039575m.g
N
0.795
Pavir.Ib02914
Panicum virgatum
Pavir.Ib02914
N
0.730
Si007883m.g
Setaria italica
Si007883m.g
N
0.714