CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAG_00796_Alt
(
Allomyces macrogynus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
AMAG_00796_Alt
T184328_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AMAG_00796_Alt
M01002_2.00
Allomyces macrogynus
NNNAYDN
NHRTNNN
PBM
Nakagawa et al.(2013)
AMAG_00796
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.664
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01002_2.00
Forkhead
24
113
KPKLSYAQLICRAICDSDNGKMTLANIYKWISDHFPFFRCADSGWQNSVRHNLSTNKCFVKEPRPKEVEGKGSYWTVDPAYINQLMGADA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_00796_Alt
Forkhead
24
113
KPKLSYAQLICRAICDSDNGKMTLANIYKWISDHFPFFRCADSGWQNSVRHNLSTNKCFVKEPRPKEVEGKGSYWTVDPAYINQLMGADA
Links
Other
Forkhead
family TFs
Other
Allomyces macrogynus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_02299
Allomyces macrogynus
AMAG_02299
I
0.890