CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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foxm
(
Ciona intestinalis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSCING00000008790
T185332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
foxm
M01975_2.00
Ciona intestinalis
RWHAACAWN
NWTGTTDWY
PBM
Weirauch et al.(2014)
pTH5634
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.664
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01975_2.00
Forkhead
1
81
RPPYSYMALIQFAINSSSTGKMTLRQIYQWIEEKFPYFKSAKPGWKNSIRHNLSLHDIFVRQVTTGSKASYWTLRSDLNIR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000017891
Forkhead
334
414
RPPYSYMALIQFAINSSSTGKMTLRQIYQWIEEKFPYFKSAKPGWKNSIRHNLSLHDIFVRQVTTGSKASYWTLRSDLNIR
Links
Other
Forkhead
family TFs
Other
Ciona intestinalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAVG00000004837
Ciona savignyi
ENSCSAVG00000004837
I
0.743