CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fkh-8
(
Caenorhabditis elegans
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
WBGene00001440
T188806_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXI1
M03026_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.674
0.435
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.674
0.435
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.674
0.435
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.674
0.435
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.674
0.435
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.674
0.435
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.674
0.435
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.674
0.435
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.674
0.424
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F40H3.4a
Forkhead
56
144
KPPYSYSQLIRLAIEDTPDKKCTLAEIYSFIAHNFQFYRENRNSSWKNSIRHNLSLNKQFSRIEKTDGDRRGWWVCVDPPAKKPRILKG
F40H3.4b
Forkhead
74
162
KPPYSYSQLIRLAIEDTPDKKCTLAEIYSFIAHNFQFYRENRNSSWKNSIRHNLSLNKQFSRIEKTDGDRRGWWVCVDPPAKKPRILKG
Links
Other
Forkhead
family TFs
Other
Caenorhabditis elegans
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE26317
Caenorhabditis remanei
CRE26317
I
0.770
CBG02587
Caenorhabditis briggsae
CBG02587
N
0.769
CBN06026
Caenorhabditis brenneri
CBN06026
I
0.759
CBN31521
Caenorhabditis brenneri
CBN31521
I
0.759
CJA35112
Caenorhabditis japonica
CJA35112
N
0.755
scaffold1659-EXSNAP2012.4
Pristionchus exspectatus
scaffold1659-EXSNAP2012.4
I
0.718
PODANS_7_5690
Podospora anserina
PODANS_7_5690
I
0.698
foxi2.S
Xenopus laevis
XB-GENE-982127
I
0.697
SNAPOd2T00017674001
Oikopleura dioica
SNAPOd2T00017674001
I
0.696
Smp_145650
Schistosoma mansoni
Smp_145650
I
0.695
A_00735
Schistosoma haematobium
A_00735
I
0.695
SCUD_0002144401
Schistosoma curassoni
SCUD_0002144401
I
0.695
SMRZ_0002168001
Schistosoma margrebowiei
SMRZ_0002168001
I
0.695
SMTD_0000908801
Schistosoma mattheei
SMTD_0000908801
I
0.695
SROB_0001634001
Schistosoma rodhaini
SROB_0001634001
I
0.695
BGHDH14_bgh04622
Blumeria graminis
BGHDH14_bgh04622
I
0.692
ENSMEUG00000012884
Macropus eugenii
ENSMEUG00000012884
I
0.692
Pvit_14157
Pogona vitticeps
Pvit_14157
I
0.692
SPU_023894
Strongylocentrotus purpuratus
SPU_023894
I
0.690
EV44_g2043
Erysiphe necator
EV44_g2043
I
0.687
AATE010245
Anopheles atroparvus
AATE010245
I
0.678
ASIS018090
Anopheles sinensis
ASIS018090
I
0.678
LotgiG106315
Lottia gigantea
LotgiG106315
I
0.677
FOXI1
Anolis carolinensis
ENSACAG00000015950
I
0.674
ENSAMEG00000001516
Ailuropoda melanoleuca
ENSAMEG00000001516
I
0.674
ENSAMXG00000008393
Astyanax mexicanus
ENSAMXG00000008393
I
0.674
FOXI1
Bos taurus
ENSBTAG00000014620
I
0.674
FOXI1
Canis familiaris
ENSCAFG00000016968
I
0.674
FOXI1
Callithrix jacchus
ENSCJAG00000011646
I
0.674
ENSCSAG00000010076
Chlorocebus sabaeus
ENSCSAG00000010076
I
0.674
FOXI1
Dasypus novemcinctus
ENSDNOG00000007480
I
0.674
ENSFALG00000009556
Ficedula albicollis
ENSFALG00000009556
I
0.674
FOXI1
Felis catus
ENSFCAG00000000835
I
0.674
FOXI1
Homo sapiens
ENSG00000168269
D
0.674
foxi3a
Gasterosteus aculeatus
ENSGACG00000018474
I
0.674
FOXI1
Gorilla gorilla
ENSGGOG00000015780
I
0.674
ENSGMOG00000001944
Gadus morhua
ENSGMOG00000001944
I
0.674
ENSLACG00000017904
Latimeria chalumnae
ENSLACG00000017904
I
0.674
FOXI1
Loxodonta africana
ENSLAFG00000026591
I
0.674
ENSMEUG00000000316
Macropus eugenii
ENSMEUG00000000316
I
0.674
FOXI1
Microcebus murinus
ENSMICG00000012575
I
0.674
FOXI1
Myotis lucifugus
ENSMLUG00000027832
I
0.674
FOXI1
Macaca mulatta
ENSMMUG00000014124
I
0.674
FOXI1
Monodelphis domestica
ENSMODG00000006890
I
0.674
ENSMPUG00000012982
Mustela putorius furo
ENSMPUG00000012982
I
0.674
Foxi1
Mus musculus
ENSMUSG00000047861
D
0.674
ENSNLEG00000005109
Nomascus leucogenys
ENSNLEG00000005109
I
0.674
ENSOARG00000003151
Ovis aries
ENSOARG00000003151
I
0.674
FOXI1
Oryctolagus cuniculus
ENSOCUG00000000836
I
0.674
FOXI1
Otolemur garnettii
ENSOGAG00000032689
I
0.674
ENSONIG00000017618
Oreochromis niloticus
ENSONIG00000017618
I
0.674
ENSPANG00000013256
Papio anubis
ENSPANG00000013256
I
0.674
FOXI1
Procavia capensis
ENSPCAG00000006657
I
0.674
ENSPFOG00000015741
Poecilia formosa
ENSPFOG00000015741
I
0.674
ENSPPYG00000016029
Pongo abelii
ENSPPYG00000016029
I
0.674
FOXI1
Pan troglodytes
ENSPTRG00000017514
I
0.674
FOXI1
Pteropus vampyrus
ENSPVAG00000005974
I
0.674
Foxi1
Rattus norvegicus
ENSRNOG00000006293
I
0.674
ENSSHAG00000018578
Sarcophilus harrisii
ENSSHAG00000018578
I
0.674
FOXI1
Sus scrofa
ENSSSCG00000017009
I
0.674
ENSSTOG00000016524
Ictidomys tridecemlineatus
ENSSTOG00000016524
I
0.674
FOXI1
Tupaia belangeri
ENSTBEG00000000162
I
0.674
FOXI1
Taeniopygia guttata
ENSTGUG00000001568
I
0.674
foxi3a
Tetraodon nigroviridis
ENSTNIG00000017058
I
0.674
foxi3a
Takifugu rubripes
ENSTRUG00000007060
I
0.674
FOXI1
Tursiops truncatus
ENSTTRG00000002178
I
0.674
ENSXMAG00000010462
Xiphophorus maculatus
ENSXMAG00000010462
I
0.674
ENSBTAP00000050534-D2
Bos grunniens
ENSBTAP00000050534-D2
I
0.674
ENSP00000304286
Macaca fascicularis
ENSP00000304286
I
0.674
Gfo_R011197
Geospiza fortis
Gfo_R011197
I
0.674
Myotis_brandtii_FOXI1_10007902
Myotis brandtii
Myotis_brandtii_FOXI1_10007902
I
0.674
Ogr15673
Ophisaurus gracilis
Ogr15673
I
0.674
Pvit_09672
Pogona vitticeps
Pvit_09672
I
0.674
foxi1
Xenopus tropicalis
XB-GENE-494125
I
0.674
foxi1.L
Xenopus laevis
XB-GENE-494129
I
0.674
fd68A
Drosophila melanogaster
FBgn0036134
I
0.673
GG13935
Drosophila erecta
FBgn0106198
I
0.673
GH14639
Drosophila grimshawi
FBgn0122115
I
0.673
GI11623
Drosophila mojavensis
FBgn0134383
I
0.673
GL22763
Drosophila persimilis
FBgn0160354
I
0.673
GK20555
Drosophila willistoni
FBgn0222552
I
0.673
GE20234
Drosophila yakuba
FBgn0237554
I
0.673
LCUP004460
Lucilia cuprina
LCUP004460
I
0.673
MDOA009504
Musca domestica
MDOA009504
I
0.673
DAPPUDRAFT_332896
Daphnia pulex
DAPPUDRAFT_332896
I
0.672
NV14169
Nasonia vitripennis
NV14169
I
0.672
TC005482
Tribolium castaneum
TC005482
I
0.672
Hsal_11379--XP_623740.2_APIME
Harpegnathos saltator
Hsal_11379--XP_623740.2_APIME
I
0.672
CLEC005770
Cimex lectularius
CLEC005770
I
0.672
LDEC009844
Leptinotarsa decemlineata
LDEC009844
I
0.672
Ocbimv22014751m.g
Octopus bimaculoides
Ocbimv22014751m.g
I
0.671
csin104981
Clonorchis sinensis
csin104981
I
0.670
T265_14440
Opisthorchis viverrini
T265_14440
I
0.670
ADAC001422
Anopheles darlingi
ADAC001422
I
0.668
AALB004405
Anopheles albimanus
AALB004405
I
0.668
CapteG23732
Capitella teleta
CapteG23732
I
0.665
ENSMEUG00000016168
Macropus eugenii
ENSMEUG00000016168
I
0.665
foxi2
Xenopus tropicalis
XB-GENE-982122
I
0.665
ENSAMEG00000010082
Ailuropoda melanoleuca
ENSAMEG00000010082
I
0.664
FOXI3
Bos taurus
ENSBTAG00000040093
I
0.664
FOXI3
Canis familiaris
ENSCAFG00000031026
I
0.664
FOXI3
Callithrix jacchus
ENSCJAG00000019348
I
0.664
ENSCSAG00000016393
Chlorocebus sabaeus
ENSCSAG00000016393
I
0.664
ENSCSAVG00000005981
Ciona savignyi
ENSCSAVG00000005981
I
0.664
FOXI3
Dasypus novemcinctus
ENSDNOG00000024502
I
0.664
FOXI3
Homo sapiens
ENSG00000214336
I
0.664
FOXI3
Gorilla gorilla
ENSGGOG00000001319
I
0.664
FOXI3
Loxodonta africana
ENSLAFG00000020800
I
0.664
FOXI3
Macaca mulatta
ENSMMUG00000014248
I
0.664
ENSMPUG00000009340
Mustela putorius furo
ENSMPUG00000009340
I
0.664
Foxi3
Mus musculus
ENSMUSG00000055874
I
0.664
ENSNLEG00000003025
Nomascus leucogenys
ENSNLEG00000003025
I
0.664
ENSOARG00000020764
Ovis aries
ENSOARG00000020764
I
0.664
ENSOGAG00000029215
Otolemur garnettii
ENSOGAG00000029215
I
0.664
ENSPANG00000020125
Papio anubis
ENSPANG00000020125
I
0.664
FOXI3
Pteropus vampyrus
ENSPVAG00000001708
I
0.664
Foxi3
Rattus norvegicus
ENSRNOG00000006491
I
0.664
ENSSTOG00000024731
Ictidomys tridecemlineatus
ENSSTOG00000024731
I
0.664
ENSTSYG00000004092
Tarsius syrichta
ENSTSYG00000004092
I
0.664
ENSBTAP00000050534-D1
Bos grunniens
ENSBTAP00000050534-D1
I
0.664