fkh-8 (Caenorhabditis elegans)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 WBGene00001440 T188806_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in neurons. Orthologous to human FOXR1 (forkhead box R1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXI1
M03026_2.00 		Homo sapiens
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
FOXI1_1 		0.674 0.435
FOXI1
M03027_2.00 		Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY		 SELEX
Jolma et al.(2013)
FOXI1_2 		0.674 0.435
FOXI1
M04827_2.00 		Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX 		0.674 0.435
FOXI1
M04829_2.00 		Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX 		0.674 0.435
FOXI1
M09095_2.00 		Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B 		0.674 0.435
FOXI1
M10556_2.00 		Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD		 Transfac
Matys et al.(2006)
V$HFH3_01 		0.674 0.435
FOXI1
M04828_2.00 		Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX 		0.674 0.435
FOXI1
M04830_2.00 		Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX 		0.674 0.435
Foxi1
M09109_2.00 		Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B 		0.674 0.424
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F40H3.4a Forkhead 56 144
F40H3.4b Forkhead 74 162

Links

Other Forkhead family TFs
Other Caenorhabditis elegans TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE26317 Caenorhabditis remanei CRE26317 I 0.770
CBG02587 Caenorhabditis briggsae CBG02587 N 0.769
CBN31521 Caenorhabditis brenneri CBN31521 I 0.759
CBN06026 Caenorhabditis brenneri CBN06026 I 0.759
CJA35112 Caenorhabditis japonica CJA35112 N 0.755
scaffold1659-EXSNAP2012.4 Pristionchus exspectatus scaffold1659-EXSNAP2012.4 I 0.718
PODANS_7_5690 Podospora anserina PODANS_7_5690 I 0.698
foxi2.S Xenopus laevis XB-GENE-982127 I 0.697
SNAPOd2T00017674001 Oikopleura dioica SNAPOd2T00017674001 I 0.696
SMTD_0000908801 Schistosoma mattheei SMTD_0000908801 I 0.695
SROB_0001634001 Schistosoma rodhaini SROB_0001634001 I 0.695
Smp_145650 Schistosoma mansoni Smp_145650 I 0.695
SCUD_0002144401 Schistosoma curassoni SCUD_0002144401 I 0.695
SMRZ_0002168001 Schistosoma margrebowiei SMRZ_0002168001 I 0.695
A_00735 Schistosoma haematobium A_00735 I 0.695
Pvit_14157 Pogona vitticeps Pvit_14157 I 0.692
BGHDH14_bgh04622 Blumeria graminis BGHDH14_bgh04622 I 0.692
ENSMEUG00000012884 Macropus eugenii ENSMEUG00000012884 I 0.692
SPU_023894 Strongylocentrotus purpuratus SPU_023894 I 0.690
EV44_g2043 Erysiphe necator EV44_g2043 I 0.687
ASIS018090 Anopheles sinensis ASIS018090 I 0.678
AATE010245 Anopheles atroparvus AATE010245 I 0.678
LotgiG106315 Lottia gigantea LotgiG106315 I 0.677
ENSSTOG00000016524 Ictidomys tridecemlineatus ENSSTOG00000016524 I 0.674
FOXI1 Tupaia belangeri ENSTBEG00000000162 I 0.674
FOXI1 Sus scrofa ENSSSCG00000017009 I 0.674
ENSSHAG00000018578 Sarcophilus harrisii ENSSHAG00000018578 I 0.674
ENSPPYG00000016029 Pongo abelii ENSPPYG00000016029 I 0.674
FOXI1 Taeniopygia guttata ENSTGUG00000001568 I 0.674
ENSONIG00000017618 Oreochromis niloticus ENSONIG00000017618 I 0.674
FOXI1 Otolemur garnettii ENSOGAG00000032689 I 0.674
ENSPANG00000013256 Papio anubis ENSPANG00000013256 I 0.674
FOXI1 Procavia capensis ENSPCAG00000006657 I 0.674
FOXI1 Pteropus vampyrus ENSPVAG00000005974 I 0.674
ENSPFOG00000015741 Poecilia formosa ENSPFOG00000015741 I 0.674
Foxi1 Rattus norvegicus ENSRNOG00000006293 I 0.674
ENSP00000304286 Macaca fascicularis ENSP00000304286 I 0.674
Ogr15673 Ophisaurus gracilis Ogr15673 I 0.674
Myotis_brandtii_FOXI1_10007902 Myotis brandtii Myotis_brandtii_FOXI1_10007902 I 0.674
Pvit_09672 Pogona vitticeps Pvit_09672 I 0.674
foxi1 Xenopus tropicalis XB-GENE-494125 I 0.674
foxi1.L Xenopus laevis XB-GENE-494129 I 0.674
Gfo_R011197 Geospiza fortis Gfo_R011197 I 0.674
FOXI1 Oryctolagus cuniculus ENSOCUG00000000836 I 0.674
foxi3a Takifugu rubripes ENSTRUG00000007060 I 0.674
FOXI1 Tursiops truncatus ENSTTRG00000002178 I 0.674
ENSXMAG00000010462 Xiphophorus maculatus ENSXMAG00000010462 I 0.674
ENSBTAP00000050534-D2 Bos grunniens ENSBTAP00000050534-D2 I 0.674
foxi3a Tetraodon nigroviridis ENSTNIG00000017058 I 0.674
FOXI1 Pan troglodytes ENSPTRG00000017514 I 0.674
FOXI1 Loxodonta africana ENSLAFG00000026591 I 0.674
ENSCSAG00000010076 Chlorocebus sabaeus ENSCSAG00000010076 I 0.674
ENSMEUG00000000316 Macropus eugenii ENSMEUG00000000316 I 0.674
FOXI1 Homo sapiens ENSG00000168269 D 0.674
FOXI1 Myotis lucifugus ENSMLUG00000027832 I 0.674
FOXI1 Dasypus novemcinctus ENSDNOG00000007480 I 0.674
ENSLACG00000017904 Latimeria chalumnae ENSLACG00000017904 I 0.674
foxi3a Gasterosteus aculeatus ENSGACG00000018474 I 0.674
FOXI1 Felis catus ENSFCAG00000000835 I 0.674
ENSFALG00000009556 Ficedula albicollis ENSFALG00000009556 I 0.674
FOXI1 Gorilla gorilla ENSGGOG00000015780 I 0.674
ENSGMOG00000001944 Gadus morhua ENSGMOG00000001944 I 0.674
FOXI1 Macaca mulatta ENSMMUG00000014124 I 0.674
FOXI1 Microcebus murinus ENSMICG00000012575 I 0.674
ENSAMXG00000008393 Astyanax mexicanus ENSAMXG00000008393 I 0.674
Foxi1 Mus musculus ENSMUSG00000047861 D 0.674
FOXI1 Anolis carolinensis ENSACAG00000015950 I 0.674
ENSNLEG00000005109 Nomascus leucogenys ENSNLEG00000005109 I 0.674
ENSOARG00000003151 Ovis aries ENSOARG00000003151 I 0.674
ENSMPUG00000012982 Mustela putorius furo ENSMPUG00000012982 I 0.674
ENSAMEG00000001516 Ailuropoda melanoleuca ENSAMEG00000001516 I 0.674
FOXI1 Monodelphis domestica ENSMODG00000006890 I 0.674
FOXI1 Callithrix jacchus ENSCJAG00000011646 I 0.674
FOXI1 Canis familiaris ENSCAFG00000016968 I 0.674
FOXI1 Bos taurus ENSBTAG00000014620 I 0.674
GK20555 Drosophila willistoni FBgn0222552 I 0.673
GE20234 Drosophila yakuba FBgn0237554 I 0.673
LCUP004460 Lucilia cuprina LCUP004460 I 0.673
GL22763 Drosophila persimilis FBgn0160354 I 0.673
GI11623 Drosophila mojavensis FBgn0134383 I 0.673
MDOA009504 Musca domestica MDOA009504 I 0.673
GG13935 Drosophila erecta FBgn0106198 I 0.673
fd68A Drosophila melanogaster FBgn0036134 I 0.673
GH14639 Drosophila grimshawi FBgn0122115 I 0.673
DAPPUDRAFT_332896 Daphnia pulex DAPPUDRAFT_332896 I 0.672
CLEC005770 Cimex lectularius CLEC005770 I 0.672
LDEC009844 Leptinotarsa decemlineata LDEC009844 I 0.672
Hsal_11379--XP_623740.2_APIME Harpegnathos saltator Hsal_11379--XP_623740.2_APIME I 0.672
NV14169 Nasonia vitripennis NV14169 I 0.672
TC005482 Tribolium castaneum TC005482 I 0.672
Ocbimv22014751m.g Octopus bimaculoides Ocbimv22014751m.g I 0.671
csin104981 Clonorchis sinensis csin104981 I 0.670
T265_14440 Opisthorchis viverrini T265_14440 I 0.670
ADAC001422 Anopheles darlingi ADAC001422 I 0.668
AALB004405 Anopheles albimanus AALB004405 I 0.668
ENSMEUG00000016168 Macropus eugenii ENSMEUG00000016168 I 0.665
CapteG23732 Capitella teleta CapteG23732 I 0.665
foxi2 Xenopus tropicalis XB-GENE-982122 I 0.665
FOXI3 Pteropus vampyrus ENSPVAG00000001708 I 0.664
FOXI3 Bos taurus ENSBTAG00000040093 I 0.664
ENSMPUG00000009340 Mustela putorius furo ENSMPUG00000009340 I 0.664
Foxi3 Mus musculus ENSMUSG00000055874 I 0.664
ENSOGAG00000029215 Otolemur garnettii ENSOGAG00000029215 I 0.664
ENSNLEG00000003025 Nomascus leucogenys ENSNLEG00000003025 I 0.664
ENSPANG00000020125 Papio anubis ENSPANG00000020125 I 0.664
ENSAMEG00000010082 Ailuropoda melanoleuca ENSAMEG00000010082 I 0.664
Foxi3 Rattus norvegicus ENSRNOG00000006491 I 0.664
FOXI3 Dasypus novemcinctus ENSDNOG00000024502 I 0.664
ENSOARG00000020764 Ovis aries ENSOARG00000020764 I 0.664
FOXI3 Gorilla gorilla ENSGGOG00000001319 I 0.664
FOXI3 Homo sapiens ENSG00000214336 I 0.664
ENSBTAP00000050534-D1 Bos grunniens ENSBTAP00000050534-D1 I 0.664
FOXI3 Loxodonta africana ENSLAFG00000020800 I 0.664
ENSCSAVG00000005981 Ciona savignyi ENSCSAVG00000005981 I 0.664
FOXI3 Macaca mulatta ENSMMUG00000014248 I 0.664
FOXI3 Callithrix jacchus ENSCJAG00000019348 I 0.664
ENSSTOG00000024731 Ictidomys tridecemlineatus ENSSTOG00000024731 I 0.664
ENSTSYG00000004092 Tarsius syrichta ENSTSYG00000004092 I 0.664
ENSCSAG00000016393 Chlorocebus sabaeus ENSCSAG00000016393 I 0.664
FOXI3 Canis familiaris ENSCAFG00000031026 I 0.664