CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Alligator_sinensis_CCG017175.1
(
Alligator sinensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Alligator_sinensis_CCG017175.1
T188956_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXI1
M03026_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.686
0.867
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.686
0.867
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.686
0.867
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.686
0.867
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.686
0.867
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.686
0.867
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.686
0.867
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.686
0.867
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.686
0.867
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG017175.1
Forkhead
1
79
MAIQSAPGRRLTLSRIYQYVTENFPFYKRSKAGWQNSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNF
Links
Other
Forkhead
family TFs
Other
Alligator sinensis
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R007110
Calypte anna
Aan_R007110
I
0.721
foxi-a
Ciona intestinalis
ENSCING00000007221
I
0.717
ENSCSAVG00000005989
Ciona savignyi
ENSCSAVG00000005989
I
0.717
ENSOGAG00000028090
Otolemur garnettii
ENSOGAG00000028090
I
0.709
ENSGMOG00000019598
Gadus morhua
ENSGMOG00000019598
I
0.708
ENSLOCG00000008171
Lepisosteus oculatus
ENSLOCG00000008171
I
0.697
ENSAMEG00000018773
Ailuropoda melanoleuca
ENSAMEG00000018773
I
0.692
ENSAMXG00000005839
Astyanax mexicanus
ENSAMXG00000005839
I
0.692
FOXS1
Bos taurus
ENSBTAG00000009206
I
0.692
FOXS1
Callithrix jacchus
ENSCJAG00000023288
I
0.692
FOXS1
Cavia porcellus
ENSCPOG00000025295
I
0.692
ENSCSAG00000018667
Chlorocebus sabaeus
ENSCSAG00000018667
I
0.692
FOXS1
Dasypus novemcinctus
ENSDNOG00000045647
I
0.692
FOXS1
Equus caballus
ENSECAG00000001159
I
0.692
FOXS1
Felis catus
ENSFCAG00000001900
I
0.692
FOXS1
Homo sapiens
ENSG00000179772
I
0.692
FOXS1
Gorilla gorilla
ENSGGOG00000023442
I
0.692
FOXS1
Loxodonta africana
ENSLAFG00000013119
I
0.692
FOXS1
Myotis lucifugus
ENSMLUG00000007305
I
0.692
FOXS1
Macaca mulatta
ENSMMUG00000000969
I
0.692
Foxs1
Mus musculus
ENSMUSG00000074676
I
0.692
ENSOARG00000001757
Ovis aries
ENSOARG00000001757
I
0.692
FOXS1
Oryctolagus cuniculus
ENSOCUG00000021480
I
0.692
FOXS1
Otolemur garnettii
ENSOGAG00000030777
I
0.692
ENSPANG00000006639
Papio anubis
ENSPANG00000006639
I
0.692
ENSPPYG00000010894
Pongo abelii
ENSPPYG00000010894
I
0.692
FOXS1
Pan troglodytes
ENSPTRG00000013363
I
0.692
FOXS1
Pteropus vampyrus
ENSPVAG00000006116
I
0.692
Foxs1
Rattus norvegicus
ENSRNOG00000008529
I
0.692
ENSSTOG00000012148
Ictidomys tridecemlineatus
ENSSTOG00000012148
I
0.692
FOXS1
Tursiops truncatus
ENSTTRG00000007930
I
0.692
ENSBTAP00000012128-D1
Bos grunniens
ENSBTAP00000012128-D1
I
0.692
Myotis_brandtii_FOXS1_10023769
Myotis brandtii
Myotis_brandtii_FOXS1_10023769
I
0.692
ENSMEUG00000005856
Macropus eugenii
ENSMEUG00000005856
I
0.689
FOXS1
Monodelphis domestica
ENSMODG00000019485
I
0.689
ENSSHAG00000012946
Sarcophilus harrisii
ENSSHAG00000012946
I
0.689
ENSNLEG00000009700
Nomascus leucogenys
ENSNLEG00000009700
I
0.687
FOXI1
Anolis carolinensis
ENSACAG00000015950
I
0.686
ENSAMEG00000001516
Ailuropoda melanoleuca
ENSAMEG00000001516
I
0.686
ENSAMXG00000008393
Astyanax mexicanus
ENSAMXG00000008393
I
0.686
FOXI1
Bos taurus
ENSBTAG00000014620
I
0.686
FOXI1
Canis familiaris
ENSCAFG00000016968
I
0.686
FOXI1
Callithrix jacchus
ENSCJAG00000011646
I
0.686
ENSCSAG00000010076
Chlorocebus sabaeus
ENSCSAG00000010076
I
0.686
FOXI1
Dasypus novemcinctus
ENSDNOG00000007480
I
0.686
ENSECAG00000006873
Equus caballus
ENSECAG00000006873
I
0.686
ENSFALG00000009556
Ficedula albicollis
ENSFALG00000009556
I
0.686
FOXI1
Felis catus
ENSFCAG00000000835
I
0.686
FOXI1
Homo sapiens
ENSG00000168269
D
0.686
foxi3a
Gasterosteus aculeatus
ENSGACG00000018474
I
0.686
FOXI1
Gorilla gorilla
ENSGGOG00000015780
I
0.686
ENSGMOG00000001944
Gadus morhua
ENSGMOG00000001944
I
0.686
ENSLACG00000017904
Latimeria chalumnae
ENSLACG00000017904
I
0.686
FOXI1
Loxodonta africana
ENSLAFG00000026591
I
0.686
ENSMEUG00000000316
Macropus eugenii
ENSMEUG00000000316
I
0.686
FOXI1
Microcebus murinus
ENSMICG00000012575
I
0.686
FOXI1
Myotis lucifugus
ENSMLUG00000027832
I
0.686
FOXI1
Macaca mulatta
ENSMMUG00000014124
I
0.686
FOXI1
Monodelphis domestica
ENSMODG00000006890
I
0.686
ENSMPUG00000012982
Mustela putorius furo
ENSMPUG00000012982
I
0.686
Foxi1
Mus musculus
ENSMUSG00000047861
D
0.686
ENSNLEG00000005109
Nomascus leucogenys
ENSNLEG00000005109
I
0.686
ENSOARG00000003151
Ovis aries
ENSOARG00000003151
I
0.686
FOXI1
Oryctolagus cuniculus
ENSOCUG00000000836
I
0.686
FOXI1
Otolemur garnettii
ENSOGAG00000032689
I
0.686
ENSONIG00000017618
Oreochromis niloticus
ENSONIG00000017618
I
0.686
ENSPANG00000013256
Papio anubis
ENSPANG00000013256
I
0.686
FOXI1
Procavia capensis
ENSPCAG00000006657
I
0.686
ENSPFOG00000015741
Poecilia formosa
ENSPFOG00000015741
I
0.686
ENSPPYG00000016029
Pongo abelii
ENSPPYG00000016029
I
0.686
FOXI1
Pan troglodytes
ENSPTRG00000017514
I
0.686
FOXI1
Pteropus vampyrus
ENSPVAG00000005974
I
0.686
Foxi1
Rattus norvegicus
ENSRNOG00000006293
I
0.686
ENSSHAG00000018578
Sarcophilus harrisii
ENSSHAG00000018578
I
0.686
FOXI1
Sus scrofa
ENSSSCG00000017009
I
0.686
ENSSTOG00000016524
Ictidomys tridecemlineatus
ENSSTOG00000016524
I
0.686
FOXI1
Tupaia belangeri
ENSTBEG00000000162
I
0.686
FOXI1
Taeniopygia guttata
ENSTGUG00000001568
I
0.686
foxi3a
Tetraodon nigroviridis
ENSTNIG00000017058
I
0.686
foxi3a
Takifugu rubripes
ENSTRUG00000007060
I
0.686
FOXI1
Tursiops truncatus
ENSTTRG00000002178
I
0.686
ENSXMAG00000010462
Xiphophorus maculatus
ENSXMAG00000010462
I
0.686
ENSBTAP00000050534-D2
Bos grunniens
ENSBTAP00000050534-D2
I
0.686
ENSP00000304286
Macaca fascicularis
ENSP00000304286
I
0.686
Gfo_R011197
Geospiza fortis
Gfo_R011197
I
0.686
Myotis_brandtii_FOXI1_10007902
Myotis brandtii
Myotis_brandtii_FOXI1_10007902
I
0.686
Ogr15673
Ophisaurus gracilis
Ogr15673
I
0.686
Pvit_09672
Pogona vitticeps
Pvit_09672
I
0.686
foxi1
Xenopus tropicalis
XB-GENE-494125
I
0.686
foxi1.L
Xenopus laevis
XB-GENE-494129
I
0.686
ENSPMAG00000009377
Petromyzon marinus
ENSPMAG00000009377
I
0.685
foxl1
Oryzias latipes
ENSORLG00000013881
I
0.681
FOXL1
Sus scrofa
ENSSSCG00000002658
I
0.681
ENSAPLG00000012296
Anas platyrhynchos
ENSAPLG00000012296
I
0.678
foxi3b
Danio rerio
ENSDARG00000009550
I
0.678
FOXI1
Gallus gallus
ENSGALG00000002105
I
0.678
FOXI1
Meleagris gallopavo
ENSMGAG00000002015
I
0.678
ENSPSIG00000009562
Pelodiscus sinensis
ENSPSIG00000009562
I
0.678
Aan_R013126
Calypte anna
Aan_R013126
I
0.678
Afo_R011902
Aptenodytes forsteri
Afo_R011902
I
0.678
Alligator_sinensis_CCG016013.1
Alligator sinensis
Alligator_sinensis_CCG016013.1
I
0.678
Brh_R008138
Buceros rhinoceros
Brh_R008138
I
0.678
Cmyd_10020111
Chelonia mydas
Cmyd_10020111
I
0.678
Tal_R009461
Tyto alba
Tal_R009461
I
0.678
ENSMEUG00000012884
Macropus eugenii
ENSMEUG00000012884
I
0.677
Ogr02231
Ophisaurus gracilis
Ogr02231
I
0.677
Pvit_14157
Pogona vitticeps
Pvit_14157
I
0.677
NV17129
Nasonia vitripennis
NV17129
I
0.676
ENSP00000365145
Macaca fascicularis
ENSP00000365145
I
0.673
CapteG49410
Capitella teleta
CapteG49410
I
0.671
FOXI3
Anolis carolinensis
ENSACAG00000008418
I
0.671
ENSFALG00000010199
Ficedula albicollis
ENSFALG00000010199
I
0.671
ENSGALG00000022935
Gallus gallus
ENSGALG00000022935
I
0.671
FOXI3
Taeniopygia guttata
ENSTGUG00000010866
I
0.671
Ogr17043
Ophisaurus gracilis
Ogr17043
I
0.671
Pvit_14876
Pogona vitticeps
Pvit_14876
I
0.671
SNAPOd2T00017674001
Oikopleura dioica
SNAPOd2T00017674001
I
0.671
FOXI2
Bos taurus
ENSBTAG00000006218
I
0.669
ENSLACG00000001429
Latimeria chalumnae
ENSLACG00000001429
I
0.669
ENSLACG00000015173
Latimeria chalumnae
ENSLACG00000015173
I
0.669
ENSLOCG00000009392
Lepisosteus oculatus
ENSLOCG00000009392
I
0.669
ENSPSIG00000009024
Pelodiscus sinensis
ENSPSIG00000009024
I
0.669
Cmyd_10016976
Chelonia mydas
Cmyd_10016976
I
0.669
ENSBTAP00000008160-D1
Bos grunniens
ENSBTAP00000008160-D1
I
0.669
fgenesh2_pg.scaffold_167000105
Branchiostoma floridae
fgenesh2_pg.scaffold_167000105
I
0.669
CAD31849
Xenopus laevis
CAD31849
I
0.669
HHAL002141-PA
Halyomorpha halys
HHAL002141-PA
I
0.669
foxi4.1
Xenopus tropicalis
XB-GENE-5996107
I
0.669
foxi4.1.L
Xenopus laevis
XB-GENE-5996119
I
0.669
FOXL1
Anolis carolinensis
ENSACAG00000000715
I
0.668
ENSCSAG00000004451
Chlorocebus sabaeus
ENSCSAG00000004451
I
0.668
foxi3a
Danio rerio
ENSDARG00000055926
I
0.668
FOXI2
Dasypus novemcinctus
ENSDNOG00000046789
I
0.668
ENSNLEG00000000577
Nomascus leucogenys
ENSNLEG00000000577
I
0.668
ENSPANG00000020235
Papio anubis
ENSPANG00000020235
I
0.668
ENSPFOG00000023339
Poecilia formosa
ENSPFOG00000023339
I
0.668
FOXI2
Pan troglodytes
ENSPTRG00000003052
I
0.668
FOXI2
Pteropus vampyrus
ENSPVAG00000000088
I
0.668
Cflo_03381--XP_001120632.1_APIME
Camponotus floridanus
Cflo_03381--XP_001120632.1_APIME
I
0.668
MCOS_0000744701
Mesocestoides corti
MCOS_0000744701
I
0.668
CJA14948
Caenorhabditis japonica
CJA14948
I
0.667
MESCA005008
Megaselia scalaris
MESCA005008
I
0.665
TC008064
Tribolium castaneum
TC008064
I
0.665
LDEC013670
Leptinotarsa decemlineata
LDEC013670
I
0.665
FOXI1
Cavia porcellus
ENSCPOG00000019611
I
0.664
FOXI3
Myotis lucifugus
ENSMLUG00000023270
I
0.664
KGM_09051
Danaus plexippus
KGM_09051
I
0.664
Myotis_brandtii_FOXI3_10004285
Myotis brandtii
Myotis_brandtii_FOXI3_10004285
I
0.664
ECANG7_07925
Echinococcus canadensis
ECANG7_07925
I
0.664