CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMU15031994
(
Schmidtea mediterranea
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
SMU15031994
T189624_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxj1
M00161_2.00
Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN
PBM
Badis et al.(2009)
Foxj1_3125
0.703
0.593
FOXJ1
M10547_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH4_01
0.703
0.593
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15031994
Forkhead
167
256
KPTFTFAVLISWAMKELGKPKITLSDIYGWISDNFAYYRYSDSSWQNSVRHNLSMNKYFQKVPRRKDEPGKGGFWRMNPDNIKELDHNLS
Links
Other
Forkhead
family TFs
Other
Schmidtea mediterranea
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_01406
Schistosoma haematobium
A_01406
I
0.786
csin105476
Clonorchis sinensis
csin105476
I
0.786
T265_06415
Opisthorchis viverrini
T265_06415
I
0.786
DILT_0000300801
Diphyllobothrium latum
DILT_0000300801
I
0.769
ECANG7_05018
Echinococcus canadensis
ECANG7_05018
I
0.769
EmuJ_000660100
Echinococcus multilocularis
EmuJ_000660100
I
0.769
HDID_0000845501
Hymenolepis diminuta
HDID_0000845501
I
0.769
HmN_000875600
Hymenolepis microstoma
HmN_000875600
I
0.769
HNAJ_0000187001
Hymenolepis nana
HNAJ_0000187001
I
0.769
TASK_0000605401
Taenia asiatica
TASK_0000605401
I
0.769
TsM_000185900
Taenia solium
TsM_000185900
I
0.769
TTAC_0000110701
Hydatigera taeniaeformis
TTAC_0000110701
I
0.769
LotgiG69660
Lottia gigantea
LotgiG69660
I
0.765
CapteG222987
Capitella teleta
CapteG222987
I
0.762
foxj1b
Danio rerio
ENSDARG00000088290
I
0.761
ISCW018243
Ixodes scapularis
ISCW018243
I
0.761
ENSFALG00000000971
Ficedula albicollis
ENSFALG00000000971
I
0.760
Gfo_R007395
Geospiza fortis
Gfo_R007395
I
0.760
foxj1.S
Xenopus laevis
XB-GENE-6254646
I
0.755
ENSLACG00000016329
Latimeria chalumnae
ENSLACG00000016329
I
0.753
ENSONIG00000009418
Oreochromis niloticus
ENSONIG00000009418
I
0.753
BGLB014205
Biomphalaria glabrata
BGLB014205
I
0.753
FOXJ1
Anolis carolinensis
ENSACAG00000008123
I
0.752
ENSAMXG00000006564
Astyanax mexicanus
ENSAMXG00000006564
I
0.752
ENSAPLG00000003960
Anas platyrhynchos
ENSAPLG00000003960
I
0.752
foxj1a
Danio rerio
ENSDARG00000101919
I
0.752
ENSLACG00000016929
Latimeria chalumnae
ENSLACG00000016929
I
0.752
ENSLOCG00000011207
Lepisosteus oculatus
ENSLOCG00000011207
I
0.752
FOXJ1
Meleagris gallopavo
ENSMGAG00000004252
I
0.752
ENSPSIG00000002424
Pelodiscus sinensis
ENSPSIG00000002424
I
0.752
TriadG17444
Trichoplax adhaerens
TriadG17444
I
0.752
Alligator_sinensis_CCG012275.1
Alligator sinensis
Alligator_sinensis_CCG012275.1
I
0.752
Cmyd_10016658
Chelonia mydas
Cmyd_10016658
I
0.752
Ogr16080
Ophisaurus gracilis
Ogr16080
I
0.752
Pvit_10306
Pogona vitticeps
Pvit_10306
I
0.752
foxj1
Xenopus tropicalis
XB-GENE-853648
I
0.752
foxj1.L
Xenopus laevis
XB-GENE-856300
I
0.752
ENSPMAG00000006623
Petromyzon marinus
ENSPMAG00000006623
I
0.751
Sakowv30028437m.g
Saccoglossus kowalevskii
Sakowv30028437m.g
I
0.750
foxj1a
Gasterosteus aculeatus
ENSGACG00000014879
I
0.749
foxj1a
Tetraodon nigroviridis
ENSTNIG00000011308
I
0.749
foxj1a
Takifugu rubripes
ENSTRUG00000001697
I
0.749
ENSPMAG00000005958
Petromyzon marinus
ENSPMAG00000005958
I
0.747
DAPPUDRAFT_8603
Daphnia pulex
DAPPUDRAFT_8603
I
0.734
Ocbimv22006019m.g
Octopus bimaculoides
Ocbimv22006019m.g
I
0.733
Tal_R007079
Tyto alba
Tal_R007079
I
0.732
CLEC000256
Cimex lectularius
CLEC000256
I
0.729
SMU15036325
Schmidtea mediterranea
SMU15036325
I
0.727
estExt_fgenesh2_pg.C_170078
Branchiostoma floridae
estExt_fgenesh2_pg.C_170078
I
0.726
ENSPFOG00000019618
Poecilia formosa
ENSPFOG00000019618
I
0.724
SPU_027969
Strongylocentrotus purpuratus
SPU_027969
I
0.724
Aan_R012851
Calypte anna
Aan_R012851
I
0.724
Afo_R006429
Aptenodytes forsteri
Afo_R006429
I
0.724
NEMVEDRAFT_v1g65438
Nematostella vectensis
NEMVEDRAFT_v1g65438
I
0.723
L798_14003
Zootermopsis nevadensis
L798_14003
I
0.721
foxj1.2
Xenopus tropicalis
XB-GENE-919738
I
0.720
foxj1.2.L
Xenopus laevis
XB-GENE-919747
I
0.720
SMU15026964
Schmidtea mediterranea
SMU15026964
I
0.715
ENSONIG00000019769
Oreochromis niloticus
ENSONIG00000019769
I
0.711
ENSPFOG00000004597
Poecilia formosa
ENSPFOG00000004597
I
0.711
foxj1b
Takifugu rubripes
ENSTRUG00000016940
I
0.711
FOXJ1
Taeniopygia guttata
ENSTGUG00000008019
I
0.709
foxj1b
Gasterosteus aculeatus
ENSGACG00000004462
I
0.708
ENSGMOG00000015882
Gadus morhua
ENSGMOG00000015882
I
0.705
ENSAMEG00000010217
Ailuropoda melanoleuca
ENSAMEG00000010217
I
0.703
FOXJ1
Bos taurus
ENSBTAG00000007916
I
0.703
FOXJ1
Canis familiaris
ENSCAFG00000005050
I
0.703
FOXJ1
Callithrix jacchus
ENSCJAG00000013682
I
0.703
ENSCPOG00000010965
Cavia porcellus
ENSCPOG00000010965
I
0.703
ENSCSAG00000004998
Chlorocebus sabaeus
ENSCSAG00000004998
I
0.703
FOXJ1
Dasypus novemcinctus
ENSDNOG00000036643
I
0.703
FOXJ1
Equus caballus
ENSECAG00000014390
I
0.703
FOXJ1
Felis catus
ENSFCAG00000005772
I
0.703
FOXJ1
Homo sapiens
ENSG00000129654
D
0.703
FOXJ1
Gorilla gorilla
ENSGGOG00000007282
I
0.703
FOXJ1
Loxodonta africana
ENSLAFG00000032043
I
0.703
ENSMEUG00000007843
Macropus eugenii
ENSMEUG00000007843
I
0.703
FOXJ1
Myotis lucifugus
ENSMLUG00000006595
I
0.703
FOXJ1
Macaca mulatta
ENSMMUG00000003533
I
0.703
FOXJ1
Monodelphis domestica
ENSMODG00000008306
I
0.703
ENSMPUG00000013521
Mustela putorius furo
ENSMPUG00000013521
I
0.703
Foxj1
Mus musculus
ENSMUSG00000034227
D
0.703
FOXJ1
Ornithorhynchus anatinus
ENSOANG00000014384
I
0.703
ENSOARG00000007895
Ovis aries
ENSOARG00000007895
I
0.703
FOXJ1
Oryctolagus cuniculus
ENSOCUG00000011472
I
0.703
FOXJ1
Otolemur garnettii
ENSOGAG00000026625
I
0.703
FOXJ1
Ochotona princeps
ENSOPRG00000011410
I
0.703
ENSPANG00000020054
Papio anubis
ENSPANG00000020054
I
0.703
FOXJ1
Procavia capensis
ENSPCAG00000015387
I
0.703
ENSPPYG00000008652
Pongo abelii
ENSPPYG00000008652
I
0.703
FOXJ1
Pan troglodytes
ENSPTRG00000009674
I
0.703
ENSSHAG00000017120
Sarcophilus harrisii
ENSSHAG00000017120
I
0.703
FOXJ1
Sus scrofa
ENSSSCG00000017187
I
0.703
ENSSTOG00000021584
Ictidomys tridecemlineatus
ENSSTOG00000021584
I
0.703
FOXJ1
Tursiops truncatus
ENSTTRG00000015916
I
0.703
ENSP00000323880-D1
Bos grunniens
ENSP00000323880-D1
I
0.703
CGI_10021832
Crassostrea gigas
CGI_10021832
I
0.694
foxj1b
Tetraodon nigroviridis
ENSTNIG00000012916
I
0.691
PHUM083480
Pediculus humanus
PHUM083480
I
0.691
Ogr05152
Ophisaurus gracilis
Ogr05152
I
0.688
TC005573
Tribolium castaneum
TC005573
I
0.682
SMAR007498
Strigamia maritima
SMAR007498
I
0.680
ENSMICG00000013240
Microcebus murinus
ENSMICG00000013240
I
0.679
ENSACAG00000004870
Anolis carolinensis
ENSACAG00000004870
I
0.677
LDEC013372
Leptinotarsa decemlineata
LDEC013372
I
0.668
ACYPI55143
Acyrthosiphon pisum
ACYPI55143
I
0.665