CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gtaK
(
Dictyostelium discoideum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
DDB_G0282811
T192480_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaN
M02014_2.00
Dictyostelium discoideum
NNMGATNNN
NNNATCKNN
PBM
Weirauch et al.(2014)
pTH5355
0.837
0.750
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0232953
GATA
522
557
CTSCGTTSSPEWRKGPAGNQSLCNACGLYFAKLVRR
Links
Other
GATA
family TFs
Other
Dictyostelium discoideum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFA77221.1
Polysphondylium pallidum
EFA77221.1
I
0.867
gtaN
Dictyostelium discoideum
DDB_G0287057
D
0.837
estExt_fgeneshDP_pg.C_5480001
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_5480001
I
0.837
EFA81457.1
Polysphondylium pallidum
EFA81457.1
I
0.837
M408DRAFT_61538
Serendipita vermifera
M408DRAFT_61538
I
0.822