CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC12G04230
(
Oryza punctata
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
OPUNC12G04230
T194504_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC12G04230.1
GATA
141
176
CLNCDAVETPQWRSGPMGKSTLCNACGVRLRAVGSL
OPUNC12G04230.1
GATA
269
304
CVHCGSTETPQWREGPMGRGTLCNACGVRYRQGRLL
Links
Other
GATA
family TFs
Other
Oryza punctata
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA12G0039500
Oryza glaberrima
ORGLA12G0039500
N
0.861
OS12G0168800
Oryza sativa
OS12G0168800
N
0.861
ONIVA12G03860
Oryza nivara
ONIVA12G03860
N
0.861
ORUFI12G04780
Oryza rufipogon
ORUFI12G04780
N
0.861
OMERI11G19020
Oryza meridionalis
OMERI11G19020
N
0.861
OGLUM12G04960
Oryza glumaepatula
OGLUM12G04960
N
0.861
Si010130m.g
Setaria italica
Si010130m.g
N
0.836
Pavir.J37525
Panicum virgatum
Pavir.J37525
N
0.836
Pavir.J26059
Panicum virgatum
Pavir.J26059
N
0.828
Sb08g004340
Sorghum bicolor
Sb08g004340
N
0.828
GRMZM2G067171
Zea mays
GRMZM2G067171
N
0.828
Pavir.Gb00810
Panicum virgatum
Pavir.Gb00810
N
0.826