CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_29496
(
Selaginella moellendorffii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SELMODRAFT_29496
T195157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.802
0.923
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.802
0.885
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.802
0.885
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.802
0.885
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.802
0.846
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.802
0.846
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ05626
GATA
1
26
QWRAGPEGPKTLCNACGVRFKSGRLF
Links
Other
GATA
family TFs
Other
Selaginella moellendorffii
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_29495
Selaginella moellendorffii
SELMODRAFT_29495
I
0.867
SELMODRAFT_29502
Selaginella moellendorffii
SELMODRAFT_29502
I
0.842
SELMODRAFT_29498
Selaginella moellendorffii
SELMODRAFT_29498
I
0.842
gw1.241.61.1
Physcomitrella patens
gw1.241.61.1
I
0.828
gw1.32.153.1
Physcomitrella patens
gw1.32.153.1
I
0.828
gw1.32.154.1
Physcomitrella patens
gw1.32.154.1
I
0.828
Traes_6DL_604AFCFEF
Triticum aestivum
Traes_6DL_604AFCFEF
I
0.827
TRIUR3_22272
Triticum urartu
TRIUR3_22272
I
0.827
Traes_6AL_47F6C4665
Triticum aestivum
Traes_6AL_47F6C4665
I
0.827
GSMUA_Achr11G17140_001
Musa acuminata
GSMUA_Achr11G17140_001
I
0.827
Lus10037994.g
Linum usitatissimum
Lus10037994.g
I
0.816
MTR_4g071590
Medicago truncatula
MTR_4g071590
I
0.816
MTR_4g471590
Medicago truncatula
MTR_4g471590
I
0.816
Gorai.007G049700
Gossypium raimondii
Gorai.007G049700
I
0.816
Lus10009227.g
Linum usitatissimum
Lus10009227.g
I
0.816
GSMUA_Achr2G12730_001
Musa acuminata
GSMUA_Achr2G12730_001
I
0.816
GSMUA_Achr5G19930_001
Musa acuminata
GSMUA_Achr5G19930_001
I
0.816
GSMUA_Achr3G18320_001
Musa acuminata
GSMUA_Achr3G18320_001
I
0.816
GSMUA_Achr4G24760_001
Musa acuminata
GSMUA_Achr4G24760_001
I
0.816
PGSC0003DMG400003545
Solanum tuberosum
PGSC0003DMG400003545
I
0.816
GSMUA_Achr4G29140_001
Musa acuminata
GSMUA_Achr4G29140_001
I
0.816
GSMUA_Achr5G15220_001
Musa acuminata
GSMUA_Achr5G15220_001
I
0.816
GSMUA_Achr5G13580_001
Musa acuminata
GSMUA_Achr5G13580_001
I
0.816
GSMUA_Achr4G21390_001
Musa acuminata
GSMUA_Achr4G21390_001
I
0.816
Ciclev10005658m.g
Citrus clementina
Ciclev10005658m.g
I
0.816
Aquca_009_00534
Aquilegia coerulea
Aquca_009_00534
I
0.816
TCM_000262
Theobroma cacao
TCM_000262
I
0.816
Aquca_007_00342
Aquilegia coerulea
Aquca_007_00342
I
0.816
mgf025806m
Mimulus guttatus
mgf025806m
I
0.816
Pm017785
Prunus mume
Pm017785
I
0.816
mgf006020m
Mimulus guttatus
mgf006020m
I
0.816
Solyc02g084590.2
Solanum lycopersicum
Solyc02g084590.2
I
0.816
SELMODRAFT_69567
Selaginella moellendorffii
SELMODRAFT_69567
I
0.816
Eucgr.H00105
Eucalyptus grandis
Eucgr.H00105
I
0.816
Eucgr.I02372
Eucalyptus grandis
Eucgr.I02372
I
0.816
PRUPE_ppa014583m1g
Prunus persica
PRUPE_ppa014583m1g
I
0.816
Cucsa.194390
Cucumis sativus
Cucsa.194390
I
0.816
SELMODRAFT_69566
Selaginella moellendorffii
SELMODRAFT_69566
I
0.816
orange1.1g024771m.g
Citrus sinensis
orange1.1g024771m.g
I
0.816
Eucgr.J02392
Eucalyptus grandis
Eucgr.J02392
I
0.816
Gorai.007G197900
Gossypium raimondii
Gorai.007G197900
I
0.816
GLYMA07G14750
Glycine max
GLYMA07G14750
I
0.816
Bo7g100740
Brassica oleracea
Bo7g100740
I
0.816
Bo1g060480
Brassica oleracea
Bo1g060480
I
0.816
LjSGA_052745.2
Lotus japonicus
LjSGA_052745.2
I
0.816
GLYMA02G07850
Glycine max
GLYMA02G07850
I
0.816
AMTR_s00004p00074220
Amborella trichopoda
AMTR_s00004p00074220
I
0.816
GLYMA10G25480
Glycine max
GLYMA10G25480
I
0.816
Bra038882
Brassica rapa
Bra038882
I
0.816
Thhalv10025666m.g
Eutrema salsugineum
Thhalv10025666m.g
I
0.816
Bra037173
Brassica rapa
Bra037173
I
0.816
Bra012871
Brassica rapa
Bra012871
I
0.816
OS02G0645600
Oryza sativa
OS02G0645600
I
0.813
OS04G0539500
Oryza sativa
OS04G0539500
I
0.813
ORGLA02G0221200
Oryza glaberrima
ORGLA02G0221200
I
0.813
ONIVA04G18420
Oryza nivara
ONIVA04G18420
I
0.813
OPUNC04G17860
Oryza punctata
OPUNC04G17860
I
0.813
ORUFI02G27260
Oryza rufipogon
ORUFI02G27260
I
0.813
ORUFI04G21800
Oryza rufipogon
ORUFI04G21800
I
0.813
Traes_2AL_0EB34993E
Triticum aestivum
Traes_2AL_0EB34993E
I
0.813
Sb06g023940
Sorghum bicolor
Sb06g023940
I
0.813
BRADI3G50160
Brachypodium distachyon
BRADI3G50160
I
0.813
Si010126m.g
Setaria italica
Si010126m.g
I
0.813
Si017219m.g
Setaria italica
Si017219m.g
I
0.813
Sb04g033450
Sorghum bicolor
Sb04g033450
I
0.813
BRADI5G17057
Brachypodium distachyon
BRADI5G17057
I
0.813
Traes_2BL_6899C8ABD
Triticum aestivum
Traes_2BL_6899C8ABD
I
0.813
BGIOSGA016846
Oryza indica
BGIOSGA016846
I
0.813
F775_20887
Aegilops tauschii
F775_20887
I
0.813
GRMZM2G404973
Zea mays
GRMZM2G404973
I
0.813
Traes_2DL_EEF2E71FA
Triticum aestivum
Traes_2DL_EEF2E71FA
I
0.813
OPUNC02G23650
Oryza punctata
OPUNC02G23650
I
0.813
Pavir.Ab02582
Panicum virgatum
Pavir.Ab02582
I
0.813
GRMZM2G054615
Zea mays
GRMZM2G054615
I
0.813
Pavir.Ga00679
Panicum virgatum
Pavir.Ga00679
I
0.813
LPERR04G16350
Leersia perrieri
LPERR04G16350
I
0.813
ONIVA02G28320
Oryza nivara
ONIVA02G28320
I
0.813
Pavir.Gb01182
Panicum virgatum
Pavir.Gb01182
I
0.813
GRMZM2G140669
Zea mays
GRMZM2G140669
I
0.813
BGIOSGA008714
Oryza indica
BGIOSGA008714
I
0.813
OGLUM04G20120
Oryza glumaepatula
OGLUM04G20120
I
0.813
OGLUM02G26320
Oryza glumaepatula
OGLUM02G26320
I
0.813
OMERI02G25330
Oryza meridionalis
OMERI02G25330
I
0.813
OB04G27190
Oryza brachyantha
OB04G27190
I
0.813
cassava37880.valid.m1
Manihot esculenta
cassava37880.valid.m1
I
0.802
Cagra.0926s0073
Capsella grandiflora
Cagra.0926s0073
I
0.802
Thhalv10002609m.g
Eutrema salsugineum
Thhalv10002609m.g
I
0.802
cassava38225.valid.m1
Manihot esculenta
cassava38225.valid.m1
I
0.802
Cagra.6467s0001
Capsella grandiflora
Cagra.6467s0001
I
0.802
Carubv10014365m.g
Capsella rubella
Carubv10014365m.g
I
0.802
Cagra.0026s0014
Capsella grandiflora
Cagra.0026s0014
I
0.802
Cucsa.137630
Cucumis sativus
Cucsa.137630
I
0.802
Cucsa.308400
Cucumis sativus
Cucsa.308400
I
0.802
SapurV1A.2002s0020
Salix purpurea
SapurV1A.2002s0020
I
0.802
Bostr.0568s0044
Boechera stricta
Bostr.0568s0044
I
0.802
mgf010484m
Mimulus guttatus
mgf010484m
I
0.802
mgf002151m
Mimulus guttatus
mgf002151m
I
0.802
Thhalv10004566m.g
Eutrema salsugineum
Thhalv10004566m.g
I
0.802
mgf020912m
Mimulus guttatus
mgf020912m
I
0.802
PK01325.1
Cannabis sativa
PK01325.1
I
0.802
Carubv10017445m.g
Capsella rubella
Carubv10017445m.g
I
0.802
Aquca_030_00151
Aquilegia coerulea
Aquca_030_00151
I
0.802
Aquca_034_00184
Aquilegia coerulea
Aquca_034_00184
I
0.802
PK18657.1
Cannabis sativa
PK18657.1
I
0.802
LjSGA_027909.1
Lotus japonicus
LjSGA_027909.1
I
0.802
PK13647.1
Cannabis sativa
PK13647.1
I
0.802
mgf000143m
Mimulus guttatus
mgf000143m
I
0.802
mgf000977m
Mimulus guttatus
mgf000977m
I
0.802
Bostr.19424s0211
Boechera stricta
Bostr.19424s0211
I
0.802
SapurV1A.0680s0040
Salix purpurea
SapurV1A.0680s0040
I
0.802
SapurV1A.0308s0200
Salix purpurea
SapurV1A.0308s0200
I
0.802
Lus10023684.g
Linum usitatissimum
Lus10023684.g
I
0.802
MDP0000137305
Malus domestica
MDP0000137305
I
0.802
Lus10011762.g
Linum usitatissimum
Lus10011762.g
I
0.802
Gorai.011G238800
Gossypium raimondii
Gorai.011G238800
I
0.802
Gorai.007G287800
Gossypium raimondii
Gorai.007G287800
I
0.802
Gorai.009G313700
Gossypium raimondii
Gorai.009G313700
I
0.802
MDP0000224540
Malus domestica
MDP0000224540
I
0.802
MDP0000248942
Malus domestica
MDP0000248942
I
0.802
orange1.1g016706m.g
Citrus sinensis
orange1.1g016706m.g
I
0.802
orange1.1g020996m.g
Citrus sinensis
orange1.1g020996m.g
I
0.802
Pavir.Aa00151
Panicum virgatum
Pavir.Aa00151
I
0.802
Pavir.Aa01215
Panicum virgatum
Pavir.Aa01215
I
0.802
Pavir.Ab03246
Panicum virgatum
Pavir.Ab03246
I
0.802
MDP0000528111
Malus domestica
MDP0000528111
I
0.802
SapurV1A.0056s0470
Salix purpurea
SapurV1A.0056s0470
I
0.802
cassava35682.valid.m1
Manihot esculenta
cassava35682.valid.m1
I
0.802
SapurV1A.0518s0130
Salix purpurea
SapurV1A.0518s0130
I
0.802
Eucgr.A02086
Eucalyptus grandis
Eucgr.A02086
I
0.802
Eucgr.G01722
Eucalyptus grandis
Eucgr.G01722
I
0.802
Eucgr.G02840
Eucalyptus grandis
Eucgr.G02840
I
0.802
Ciclev10032018m.g
Citrus clementina
Ciclev10032018m.g
I
0.802
Ciclev10021190m.g
Citrus clementina
Ciclev10021190m.g
I
0.802
SapurV1A.1928s0030
Salix purpurea
SapurV1A.1928s0030
I
0.802
SapurV1A.0802s0090
Salix purpurea
SapurV1A.0802s0090
I
0.802
Eucgr.J01083
Eucalyptus grandis
Eucgr.J01083
I
0.802
SapurV1A.0657s0040
Salix purpurea
SapurV1A.0657s0040
I
0.802
gene20756-v1.0-hybrid
Fragaria vesca
gene20756-v1.0-hybrid
I
0.802
gene23279-v1.0-hybrid
Fragaria vesca
gene23279-v1.0-hybrid
I
0.802
Gorai.006G054800
Gossypium raimondii
Gorai.006G054800
I
0.802
SapurV1A.0569s0120
Salix purpurea
SapurV1A.0569s0120
I
0.802
evm.TU.supercontig_546.1
Carica papaya
evm.TU.supercontig_546.1
I
0.802
evm.TU.contig_41047
Carica papaya
evm.TU.contig_41047
I
0.802
evm.TU.supercontig_150.28
Carica papaya
evm.TU.supercontig_150.28
I
0.802
Carubv10026725m.g
Capsella rubella
Carubv10026725m.g
I
0.802
Solyc09g091250.2
Solanum lycopersicum
Solyc09g091250.2
I
0.802
GSMUA_Achr6G26330_001
Musa acuminata
GSMUA_Achr6G26330_001
I
0.802
GSMUA_Achr9G20700_001
Musa acuminata
GSMUA_Achr9G20700_001
I
0.802
LPERR02G30140
Leersia perrieri
LPERR02G30140
I
0.802
MLOC_56963
Hordeum vulgare
MLOC_56963
I
0.802
GSMUA_Achr2G02830_001
Musa acuminata
GSMUA_Achr2G02830_001
I
0.802
GSMUA_Achr1G08980_001
Musa acuminata
GSMUA_Achr1G08980_001
I
0.802
GLYMA20G32050
Glycine max
GLYMA20G32050
I
0.802
GRMZM2G163200
Zea mays
GRMZM2G163200
I
0.802
GRMZM2G379005
Zea mays
GRMZM2G379005
I
0.802
MTR_1g046680
Medicago truncatula
MTR_1g046680
I
0.802
MTR_1g094930
Medicago truncatula
MTR_1g094930
I
0.802
ONIVA02G38990
Oryza nivara
ONIVA02G38990
I
0.802
OPUNC02G33710
Oryza punctata
OPUNC02G33710
I
0.802
ORGLA02G0317800
Oryza glaberrima
ORGLA02G0317800
I
0.802
OMERI02G34480
Oryza meridionalis
OMERI02G34480
I
0.802
OGLUM02G37730
Oryza glumaepatula
OGLUM02G37730
I
0.802
MTR_6g032830
Medicago truncatula
MTR_6g032830
I
0.802
MTR_7g085410
Medicago truncatula
MTR_7g085410
I
0.802
OB02G43220
Oryza brachyantha
OB02G43220
I
0.802
GLYMA19G28650
Glycine max
GLYMA19G28650
I
0.802
GLYMA16G27171
Glycine max
GLYMA16G27171
I
0.802
Bo1g039780
Brassica oleracea
Bo1g039780
I
0.802
Bo3g081950
Brassica oleracea
Bo3g081950
I
0.802
Bo9g022010
Brassica oleracea
Bo9g022010
I
0.802
Bra001925
Brassica rapa
Bra001925
I
0.802
BGIOSGA009241
Oryza indica
BGIOSGA009241
I
0.802
GATA5
Arabidopsis thaliana
AT5G66320
I
0.802
AMTR_s00039p00112210
Amborella trichopoda
AMTR_s00039p00112210
I
0.802
GATA1
Arabidopsis thaliana
AT3G24050
D
0.802
GATA6
Arabidopsis thaliana
AT3G51080
D
0.802
Bra013870
Brassica rapa
Bra013870
I
0.802
BRADI3G54720
Brachypodium distachyon
BRADI3G54720
I
0.802
GLYMA10G35470
Glycine max
GLYMA10G35470
I
0.802
GLYMA16G04670
Glycine max
GLYMA16G04670
I
0.802
GLYMA16G26870
Glycine max
GLYMA16G26870
I
0.802
GLYMA02G08145
Glycine max
GLYMA02G08145
I
0.802
GATA5
Arabidopsis lyrata
fgenesh2_kg.8__2789__AT5G66320.1
I
0.802
F775_11212
Aegilops tauschii
F775_11212
I
0.802
GATA6
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001213
I
0.802
GATA1
Arabidopsis lyrata
fgenesh2_kg.3__2631__AT3G24050.1
I
0.802
ORUFI02G38070
Oryza rufipogon
ORUFI02G38070
I
0.802
PGSC0003DMG400003126
Solanum tuberosum
PGSC0003DMG400003126
I
0.802
BME3-ZF
Vitis vinifera
VIT_13s0019g04390
I
0.802
Ca_08250
Cicer arietinum
Ca_08250
I
0.802
Ca_08487
Cicer arietinum
Ca_08487
I
0.802
Ca_16593
Cicer arietinum
Ca_16593
I
0.802
VIT_08s0007g07550
Vitis vinifera
VIT_08s0007g07550
I
0.802
GATA1
Vitis vinifera
VIT_05s0051g00450
I
0.802
Traes_6AL_FD17E787A
Triticum aestivum
Traes_6AL_FD17E787A
I
0.802
Traes_6DL_410C5CD3B
Triticum aestivum
Traes_6DL_410C5CD3B
I
0.802
TRIUR3_08114
Triticum urartu
TRIUR3_08114
I
0.802
Ca_27641
Cicer arietinum
Ca_27641
I
0.802
Cla007764
Citrullus lanatus
Cla007764
I
0.802
cassava22621.valid.m1
Manihot esculenta
cassava22621.valid.m1
I
0.802
cassava22622.valid.m1
Manihot esculenta
cassava22622.valid.m1
I
0.802
cassava22623.valid.m1
Manihot esculenta
cassava22623.valid.m1
I
0.802
29904.m003012
Ricinus communis
29904.m003012
I
0.802
27494.m000044
Ricinus communis
27494.m000044
I
0.802
Cla013978
Citrullus lanatus
Cla013978
I
0.802
Pm018532
Prunus mume
Pm018532
I
0.802
Q76DY3_TOBAC
Nicotiana tabacum
Q76DY3_TOBAC
D
0.802
TCM_043158
Theobroma cacao
TCM_043158
I
0.802
TCM_026451
Theobroma cacao
TCM_026451
I
0.802
POPTR_0005s11960
Populus trichocarpa
POPTR_0005s11960
I
0.802
POPTR_0007s13700
Populus trichocarpa
POPTR_0007s13700
I
0.802
POPTR_0008s03880
Populus trichocarpa
POPTR_0008s03880
I
0.802
POPTR_0010s23010
Populus trichocarpa
POPTR_0010s23010
I
0.802
POPTR_0003s17340
Populus trichocarpa
POPTR_0003s17340
I
0.802
POPTR_0001s14130
Populus trichocarpa
POPTR_0001s14130
I
0.802
PGSC0003DMG400011579
Solanum tuberosum
PGSC0003DMG400011579
I
0.802
PGSC0003DMG400023341
Solanum tuberosum
PGSC0003DMG400023341
I
0.802
PGSC0003DMG400027167
Solanum tuberosum
PGSC0003DMG400027167
I
0.802
POPTR_0013s05610
Populus trichocarpa
POPTR_0013s05610
I
0.802
POPTR_0019s04860
Populus trichocarpa
POPTR_0019s04860
I
0.802
Solyc05g056120.2
Solanum lycopersicum
Solyc05g056120.2
I
0.802
AMTR_s00001p00210810
Amborella trichopoda
AMTR_s00001p00210810
I
0.802
TCM_020437
Theobroma cacao
TCM_020437
I
0.802
Solyc05g053500.2
Solanum lycopersicum
Solyc05g053500.2
I
0.802
Solyc01g110310.2
Solanum lycopersicum
Solyc01g110310.2
I
0.802
PRUPE_ppa007936mg
Prunus persica
PRUPE_ppa007936mg
I
0.802
Sb04g036520
Sorghum bicolor
Sb04g036520
I
0.802
Si017317m.g
Setaria italica
Si017317m.g
I
0.802
cassava24373.valid.m1
Manihot esculenta
cassava24373.valid.m1
I
0.802