CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si022727m.g
(
Setaria italica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Si022727m.g
T195213_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si022727m
GATA
161
195
CSNCLSCETPRWRNGPSGIQMLCNACGLRLKPENR
Si022727m
GATA
243
278
CTHCMSSKTPQWRSGPLGPKTLCNACGVRYKSGRLL
Links
Other
GATA
family TFs
Other
Setaria italica
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb08g022276
Sorghum bicolor
Sb08g022276
N
0.853
GRMZM2G009530
Zea mays
GRMZM2G009530
N
0.843
Pavir.Ca02937
Panicum virgatum
Pavir.Ca02937
N
0.818