CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SU7_0865
(
Saccharomyces arboricola
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SU7_0865
T195370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLN3
M00048_2.00
Saccharomyces cerevisiae
NHGATAAS
STTATCDN
PBM
Badis et al.(2008)
GLN3_2032
0.867
1.000
GLN3
M01545_2.00
Saccharomyces cerevisiae
HGATARN
NYTATCD
PBM
Zhu et al.(2009)
Gln3
0.867
1.000
GLN3
M07477_2.00
Saccharomyces cerevisiae
GATWR
YWATC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0307.1
0.867
1.000
GLN3
M08559_2.00
Saccharomyces cerevisiae
GATWR
YWATC
Misc
DeBoer et al.(2011)
YER040W_539
0.867
1.000
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJS44054
GATA
329
363
CFNCKTFKTPLWRRSPEGNTLCNACGLFQKLHGTM
Links
Other
GATA
family TFs
Other
Saccharomyces arboricola
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLN3
Saccharomyces cerevisiae
YER040W
D
0.867
6025_YER040W
Saccharomyces mikatae
6025_YER040W
I
0.867
6181_YER040W
Saccharomyces paradoxus
6181_YER040W
I
0.867
6302_YER040W
Saccharomyces bayanus
6302_YER040W
I
0.867
CAGL0C02277g
Candida glabrata
CAGL0C02277g
I
0.862
YALI0_F17886g
Yarrowia lipolytica
YALI0_F17886g
I
0.848
RO3G_00657
Rhizopus oryzae
RO3G_00657
I
0.844
LALA0_S01e01838g
Lachancea lanzarotensis
LALA0_S01e01838g
I
0.838
AMAG_16339
Allomyces macrogynus
AMAG_16339
I
0.823
AMAG_19058
Allomyces macrogynus
AMAG_19058
I
0.823
CPAG_02050
Candida parapsilosis
CPAG_02050
I
0.823
BN7_575
Wickerhamomyces ciferrii
BN7_575
I
0.823
CANTEDRAFT_137034
Candida tenuis
CANTEDRAFT_137034
I
0.823
CORT_0A04570
Candida orthopsilosis
CORT_0A04570
I
0.823
DEHA2F10384g
Debaryomyces hansenii
DEHA2F10384g
I
0.823
G210_5718
Candida maltosa
G210_5718
I
0.823
LELG_00353
Lodderomyces elongisporus
LELG_00353
I
0.823
RO3G_05383
Rhizopus oryzae
RO3G_05383
I
0.818