CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_130010
(
Coccomyxa subellipsoidea C169
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_fgenesh1_pg.C_130010
T196501_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
48229
GATA
563
598
CTQCGTQVTPVWRAGPYGPKTLCNACGVRYMKQVKK
Links
Other
GATA
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHLREDRAFT_171659
Chlamydomonas reinhardtii
CHLREDRAFT_171659
N
0.828
fgenesh4_pg.C_scaffold_39000154
Volvox carteri
fgenesh4_pg.C_scaffold_39000154
N
0.828