CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G267200
(
Gossypium raimondii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Gorai.013G267200
T196624_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G267200.1
GATA
137
172
CPHCEVMETPQWREGPIGPKTLCNACGVCYRSDRLF
Links
Other
GATA
family TFs
Other
Gossypium raimondii
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf008011m
Mimulus guttatus
mgf008011m
I
0.815
mgf008974m
Mimulus guttatus
mgf008974m
I
0.815
GLYMA11G20480
Glycine max
GLYMA11G20480
I
0.810
GLYMA12G08131
Glycine max
GLYMA12G08131
I
0.810
GLYMA12G29730
Glycine max
GLYMA12G29730
I
0.810
GLYMA13G40020
Glycine max
GLYMA13G40020
I
0.810
MTR_2g094600
Medicago truncatula
MTR_2g094600
I
0.810
MTR_4g058910
Medicago truncatula
MTR_4g058910
I
0.810
PGSC0003DMG400008082
Solanum tuberosum
PGSC0003DMG400008082
I
0.810
PGSC0003DMG400024319
Solanum tuberosum
PGSC0003DMG400024319
I
0.810
POPTR_0004s22140
Populus trichocarpa
POPTR_0004s22140
I
0.810
PRUPE_ppa010692mg
Prunus persica
PRUPE_ppa010692mg
I
0.810
Solyc06g075140.2
Solanum lycopersicum
Solyc06g075140.2
I
0.810
Solyc11g069510.1
Solanum lycopersicum
Solyc11g069510.1
I
0.810
TCM_042068
Theobroma cacao
TCM_042068
I
0.810
Ca_26120
Cicer arietinum
Ca_26120
I
0.810
Pm031274
Prunus mume
Pm031274
I
0.810
27538.m000326
Ricinus communis
27538.m000326
I
0.810
cassava38560.m1
Manihot esculenta
cassava38560.m1
I
0.810
mgf004653m
Mimulus guttatus
mgf004653m
I
0.810
mgf008926m
Mimulus guttatus
mgf008926m
I
0.810
Ciclev10029015m.g
Citrus clementina
Ciclev10029015m.g
I
0.810
Eucgr.J00922
Eucalyptus grandis
Eucgr.J00922
I
0.810
evm.TU.supercontig_65.5
Carica papaya
evm.TU.supercontig_65.5
I
0.810
gene16150-v1.0-hybrid
Fragaria vesca
gene16150-v1.0-hybrid
I
0.810
Gorai.004G230100
Gossypium raimondii
Gorai.004G230100
I
0.810
Gorai.009G107900
Gossypium raimondii
Gorai.009G107900
I
0.810
Lus10037398.g
Linum usitatissimum
Lus10037398.g
I
0.810
Lus10041313.g
Linum usitatissimum
Lus10041313.g
I
0.810
MDP0000166889
Malus domestica
MDP0000166889
I
0.810
MDP0000275252
Malus domestica
MDP0000275252
I
0.810
MDP0000338280
Malus domestica
MDP0000338280
I
0.810
orange1.1g023588m.g
Citrus sinensis
orange1.1g023588m.g
I
0.810
SapurV1A.0216s0150
Salix purpurea
SapurV1A.0216s0150
I
0.810
PK07315.1
Cannabis sativa
PK07315.1
I
0.810
chr3.LjT10E18.80.nc
Lotus japonicus
chr3.LjT10E18.80.nc
I
0.810
Si039011m.g
Setaria italica
Si039011m.g
I
0.806
Ca_02542
Cicer arietinum
Ca_02542
I
0.806
Cagra.1637s0009
Capsella grandiflora
Cagra.1637s0009
I
0.806
Carubv10009871m.g
Capsella rubella
Carubv10009871m.g
I
0.806
gene20754-v1.0-hybrid
Fragaria vesca
gene20754-v1.0-hybrid
I
0.806