Thhalv10002799m.g (Eutrema salsugineum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Thhalv10002799m.g T196820_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA14
M06889_2.00 		Arabidopsis thaliana
NNNWNYAGATCTDNN
NNHAGATCTRNWNNN		 Dap-seq
OMalley et al.(2016)
GATA14_col_a 		0.856 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002799m GATA 124 159

Links

Other GATA family TFs
Other Eutrema salsugineum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GATA14 Arabidopsis lyrata Al_scaffold_0005_1270 I 0.856
GATA14 Arabidopsis thaliana AT3G45170 D 0.856
Bostr.21132s0007 Boechera stricta Bostr.21132s0007 I 0.856