CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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1600010210
(
Ostreococcus tauri
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
1600010210
T197008_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
1600010210_CONSTRUCT
M01234_2.00
PBM CONSTRUCTS
NRGGTCCRCN
NGYGGACCYN
PBM
Lambert et al.(2019)
pTH9942
0.867
1.000
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
1600010210
GATA
68
106
CKECGTARTSKWRKPLSGGFGDGERVCKACFQKQRRKEC
Links
Other
GATA
family TFs
Other
Ostreococcus tauri
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
1600010210_CONSTRUCT
PBM CONSTRUCTS
1600010210_CONSTRUCT
D
0.867