CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_064162.1
(
Lotus japonicus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
LjSGA_064162.1
T197113_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_064162.1
GATA
33
68
CADCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRAC
Links
Other
GATA
family TFs
Other
Lotus japonicus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA03G39220
Glycine max
GLYMA03G39220
N
0.867
GLYMA19G41780
Glycine max
GLYMA19G41780
N
0.867
MTR_7g112330
Medicago truncatula
MTR_7g112330
N
0.856
Ca_01115
Cicer arietinum
Ca_01115
N
0.856
PRUPE_ppa013280mg
Prunus persica
PRUPE_ppa013280mg
N
0.851
Pm020093
Prunus mume
Pm020093
N
0.851